| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g21666 | 1:3,564,364-3,566,307 | + | C1H1g15139 | CX1g001768 | LOC_Os01g08290 | Os01g0178200 | - | Detail |
| C2H1g16567 | 1:3,566,925-3,568,217 | - | C1H1g09579 | - | LOC_Os01g08300 | Os01g0178300 | CDT3, OsCDT3 | Detail |
| C2H1g05074 | 1:3,569,151-3,571,509 | - | C1H1g19644 | CX1g003276 | LOC_Os01g08310 | Os01g0178400 | - | Detail |
| C2H1g22659 | 1:3,576,345-3,578,173 | - | C1H1g13257 | CX1g006768 | LOC_Os01g08320 | Os01g0178500 | OsIAA1 | Detail |
| C2H1g29886 | 1:3,583,240-3,584,610 | + | C1H1g31773 | CX1g003361 | LOC_Os01g08330 | Os01g0178600 | OsCDR1 | Detail |
| C2H1g00169 | 1:3,591,035-3,594,808 | + | C1H1g10164 | CX1g004954 | LOC_Os01g08340 | Os01g0178700 | - | Detail |
| C2H1g20461 | 1:3,598,825-3,599,124 | - | C1H1g01382 | - | - | - | - | Detail |
| C2H1g13361 | 1:3,598,838-3,599,071 | + | C1H1g25830 | - | LOC_Os01g08360 | Os01g0178850 | - | Detail |
| C2H1g02703 | 1:3,603,039-3,604,352 | - | C1H1g05955 | CX1g004634 | LOC_Os01g08380 | Os01g0179000 | - | Detail |
| C2H1g07957 | 1:3,612,328-3,616,853 | + | C1H1g30989 | CX1g003878 | LOC_Os01g08400 | Os01g0179200 | - | Detail |
| C2H1g06451 | 1:3,618,277-3,622,183 | + | C1H1g00147 | CX1g001124 | - | - | - | Detail |
| C2H1g13456 | 1:3,623,268-3,625,569 | + | C1H1g14891 | CX1g001347 | LOC_Os01g08410 | Os01g0179300 | - | Detail |
| C2H1g18435 | 1:3,626,881-3,646,234 | + | C1H1g01282 | CX1g003881 | LOC_Os01g08420 | Os01g0179400 | SSG4 | Detail |
| C2H1g10454 | 1:3,648,322-3,655,801 | + | C1H1g03761 | CX1g000976 | LOC_Os01g08430 | Os01g0179500 | - | Detail |
| C2H1g20314 | 1:3,660,318-3,661,790 | - | C1H1g18226 | CX1g000280 | LOC_Os01g08440 | Os01g0179600 | - | Detail |
| C2H1g26802 | 1:3,667,415-3,669,926 | - | C1H1g03506 | CX1g005668 | LOC_Os01g08450 | Os01g0179700 | - | Detail |
| C2H1g29431 | 1:3,673,616-3,678,068 | - | C1H1g03506 | CX1g005115 | LOC_Os01g08460 | Os01g0179800 | - | Detail |
| C2H1g08311 | 1:3,680,850-3,682,058 | - | C1H1g03506 | CX1g000517 | LOC_Os01g08464 | Os01g0179901 | - | Detail |
| C2H1g21560 | 1:3,684,743-3,686,296 | - | C1H1g12207 | CX1g007079 | LOC_Os01g08470 | Os01g0180000 | - | Detail |
| C2H1g01209 | 1:3,700,364-3,705,208 | - | C1H1g15413 | CX1g004041 | LOC_Os01g08510 | Os01g0180300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037412 | 5:24,160,890-24,161,807 | - | C1H5g20150 | C2H5g03748 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| CX5g040349 | 5:24,170,041-24,175,580 | + | C1H5g22642 | C2H5g26536 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| CX5g039590 | 5:24,179,882-24,185,096 | - | C1H5g30673 | C2H5g28332 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| CX5g038128 | 5:24,186,054-24,187,248 | + | C1H5g18644 | C2H5g01414 | - | - | - | Detail |
| CX5g040214 | 5:24,190,995-24,191,312 | - | - | - | - | - | - | Detail |
| CX5g037556 | 5:24,196,501-24,197,425 | + | C1H5g30824 | C2H5g24268 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| CX5g037802 | 5:24,198,513-24,202,879 | - | C1H5g28939 | C2H5g28493 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| CX5g037422 | 5:24,203,497-24,203,769 | - | - | - | LOC_Os04g24770 | - | - | Detail |
| CX5g037992 | 5:24,209,814-24,210,815 | + | C1H5g17437 | C2H5g09709 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| CX5g039421 | 5:24,213,222-24,215,171 | + | C1H5g00625 | C2H5g24355 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| CX5g038909 | 5:24,217,777-24,218,502 | + | C1H5g28773 | C2H5g30078 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| CX5g038520 | 5:24,228,525-24,229,641 | - | C1H8g13275 | C2H5g20837 | - | - | - | Detail |
| CX5g037463 | 5:24,230,809-24,231,396 | - | C1H5g25217 | C2H5g16972 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| CX5g040775 | 5:24,234,004-24,235,902 | - | C1H5g24861 | C2H5g06063 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| CX5g040870 | 5:24,241,776-24,244,499 | + | C1H5g08314 | C2H5g20886 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| CX5g040990 | 5:24,249,510-24,249,659 | + | - | - | - | - | - | Detail |
| CX5g038555 | 5:24,252,912-24,259,653 | + | C1H5g24542 | C2H5g02301 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| CX5g040137 | 5:24,260,874-24,264,249 | - | C1H5g04263 | C2H5g26213 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| CX5g037650 | 5:24,274,703-24,281,787 | + | C1H5g02145 | C2H5g13644 | LOC_Os05g50410 | Os05g0580500 | REC8, OsREC8, OsRad21-4 | Detail |
| CX5g040658 | 5:24,282,865-24,284,922 | + | C1H5g24080 | C2H5g28264 | LOC_Os05g50460 | Os05g0581300 | - | Detail |