| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23643 | 4:27,842,470-27,843,511 | + | C2H4g06648 | CX4g035639 | LOC_Os04g53390 | Os04g0625400 | - | Detail |
| C1H4g23670 | 4:27,849,908-27,851,053 | + | C2H4g27490 | CX4g032720 | LOC_Os04g53400 | Os04g0625500 | - | Detail |
| C1H4g19888 | 4:27,857,315-27,860,819 | + | C2H4g02286 | CX4g034210 | LOC_Os04g53440 | Os04g0625800 | RBP-L | Detail |
| C1H4g10804 | 4:27,861,819-27,866,432 | + | C2H4g06585 | CX4g032448 | LOC_Os04g53450 | Os04g0625900 | - | Detail |
| C1H4g12185 | 4:27,868,558-27,870,028 | - | C2H4g01070 | - | - | - | - | Detail |
| C1H4g24872 | 4:27,873,633-27,875,775 | - | C2H4g25188 | CX4g032312 | LOC_Os04g53460 | Os04g0626000 | - | Detail |
| C1H4g30264 | 4:27,889,977-27,892,125 | - | C2H4g30422 | CX4g032639 | LOC_Os04g53490 | Os04g0626400 | - | Detail |
| C1H4g19316 | 4:27,899,552-27,904,141 | + | C2H4g04576 | CX4g034763 | LOC_Os04g53496 | Os04g0626450 | - | Detail |
| C1H4g26212 | 4:27,915,466-27,917,686 | + | C2H4g15939 | CX4g034763 | LOC_Os04g53496 | Os04g0626500 | - | Detail |
| C1H4g23228 | 4:27,924,813-27,931,631 | + | C2H4g18160 | CX4g036551 | LOC_Os04g53496 | Os04g0626500 | - | Detail |
| C1H4g15756 | 4:27,931,284-27,935,176 | - | C2H4g27007 | CX4g033542 | LOC_Os04g53510 | Os04g0626600 | - | Detail |
| C1H4g30303 | 4:27,938,106-27,945,300 | - | C2H4g27007 | CX4g033542 | LOC_Os04g53520 | Os04g0479800 | - | Detail |
| C1H4g26337 | 4:27,945,910-27,950,708 | + | C2H4g30483 | CX4g035627 | LOC_Os04g53530 | Os04g0626900 | - | Detail |
| C1H4g28934 | 4:27,950,654-27,958,257 | - | C2H4g26106 | CX4g034251 | LOC_Os04g53540 | Os04g0569100 | ROC4, Roc4 | Detail |
| C1H4g03362 | 4:27,964,138-27,971,991 | - | C2H4g07233 | - | LOC_Os04g53550 | Os04g0627132 | - | Detail |
| C1H4g14911 | 4:27,972,244-27,972,918 | - | C2H4g10303 | CX4g034529 | LOC_Os04g53550 | Os04g0627200 | - | Detail |
| C1H4g23088 | 4:27,977,157-27,977,923 | + | C2H4g14741 | CX4g032258 | LOC_Os04g53560 | Os04g0627300 | - | Detail |
| C1H4g30660 | 4:27,982,417-27,984,005 | - | C2H4g22454 | CX4g034354 | LOC_Os04g53580 | Os04g0627400 | - | Detail |
| C1H4g27710 | 4:27,988,978-27,989,715 | - | - | CX4g032905 | LOC_Os04g53606 | Os04g0627900 | OsSUI1 | Detail |
| C1H4g12581 | 4:27,991,131-27,992,519 | - | C2H4g19362 | CX4g033798 | LOC_Os04g53612 | Os04g0628000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037412 | 5:24,160,890-24,161,807 | - | C1H5g20150 | C2H5g03748 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| CX5g040349 | 5:24,170,041-24,175,580 | + | C1H5g22642 | C2H5g26536 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| CX5g039590 | 5:24,179,882-24,185,096 | - | C1H5g30673 | C2H5g28332 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| CX5g038128 | 5:24,186,054-24,187,248 | + | C1H5g18644 | C2H5g01414 | - | - | - | Detail |
| CX5g040214 | 5:24,190,995-24,191,312 | - | - | - | - | - | - | Detail |
| CX5g037556 | 5:24,196,501-24,197,425 | + | C1H5g30824 | C2H5g24268 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| CX5g037802 | 5:24,198,513-24,202,879 | - | C1H5g28939 | C2H5g28493 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| CX5g037422 | 5:24,203,497-24,203,769 | - | - | - | LOC_Os04g24770 | - | - | Detail |
| CX5g037992 | 5:24,209,814-24,210,815 | + | C1H5g17437 | C2H5g09709 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| CX5g039421 | 5:24,213,222-24,215,171 | + | C1H5g00625 | C2H5g24355 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| CX5g038909 | 5:24,217,777-24,218,502 | + | C1H5g28773 | C2H5g30078 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| CX5g038520 | 5:24,228,525-24,229,641 | - | C1H8g13275 | C2H5g20837 | - | - | - | Detail |
| CX5g037463 | 5:24,230,809-24,231,396 | - | C1H5g25217 | C2H5g16972 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| CX5g040775 | 5:24,234,004-24,235,902 | - | C1H5g24861 | C2H5g06063 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| CX5g040870 | 5:24,241,776-24,244,499 | + | C1H5g08314 | C2H5g20886 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| CX5g040990 | 5:24,249,510-24,249,659 | + | - | - | - | - | - | Detail |
| CX5g038555 | 5:24,252,912-24,259,653 | + | C1H5g24542 | C2H5g02301 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| CX5g040137 | 5:24,260,874-24,264,249 | - | C1H5g04263 | C2H5g26213 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| CX5g037650 | 5:24,274,703-24,281,787 | + | C1H5g02145 | C2H5g13644 | LOC_Os05g50410 | Os05g0580500 | REC8, OsREC8, OsRad21-4 | Detail |
| CX5g040658 | 5:24,282,865-24,284,922 | + | C1H5g24080 | C2H5g28264 | LOC_Os05g50460 | Os05g0581300 | - | Detail |