| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037412 | 5:24,160,890-24,161,807 | - | C1H5g20150 | C2H5g03748 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| CX5g040349 | 5:24,170,041-24,175,580 | + | C1H5g22642 | C2H5g26536 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| CX5g039590 | 5:24,179,882-24,185,096 | - | C1H5g30673 | C2H5g28332 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| CX5g038128 | 5:24,186,054-24,187,248 | + | C1H5g18644 | C2H5g01414 | - | - | - | Detail |
| CX5g040214 | 5:24,190,995-24,191,312 | - | - | - | - | - | - | Detail |
| CX5g037556 | 5:24,196,501-24,197,425 | + | C1H5g30824 | C2H5g24268 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| CX5g037802 | 5:24,198,513-24,202,879 | - | C1H5g28939 | C2H5g28493 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| CX5g037422 | 5:24,203,497-24,203,769 | - | - | - | LOC_Os04g24770 | - | - | Detail |
| CX5g037992 | 5:24,209,814-24,210,815 | + | C1H5g17437 | C2H5g09709 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| CX5g039421 | 5:24,213,222-24,215,171 | + | C1H5g00625 | C2H5g24355 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| CX5g038909 | 5:24,217,777-24,218,502 | + | C1H5g28773 | C2H5g30078 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| CX5g038520 | 5:24,228,525-24,229,641 | - | C1H8g13275 | C2H5g20837 | - | - | - | Detail |
| CX5g037463 | 5:24,230,809-24,231,396 | - | C1H5g25217 | C2H5g16972 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| CX5g040775 | 5:24,234,004-24,235,902 | - | C1H5g24861 | C2H5g06063 | LOC_Os05g50350 | Os05g0579700 | - | Detail |
| CX5g040870 | 5:24,241,776-24,244,499 | + | C1H5g08314 | C2H5g20886 | LOC_Os05g50360 | Os05g0579800 | - | Detail |
| CX5g040990 | 5:24,249,510-24,249,659 | + | - | - | - | - | - | Detail |
| CX5g038555 | 5:24,252,912-24,259,653 | + | C1H5g24542 | C2H5g02301 | LOC_Os05g50370 | Os05g0579900 | - | Detail |
| CX5g040137 | 5:24,260,874-24,264,249 | - | C1H5g04263 | C2H5g26213 | LOC_Os05g50380 | Os05g0580000 | OsAGPL1, OsAPL3 | Detail |
| CX5g037650 | 5:24,274,703-24,281,787 | + | C1H5g02145 | C2H5g13644 | LOC_Os05g50410 | Os05g0580500 | REC8, OsREC8, OsRad21-4 | Detail |
| CX5g040658 | 5:24,282,865-24,284,922 | + | C1H5g24080 | C2H5g28264 | LOC_Os05g50460 | Os05g0581300 | - | Detail |