| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14276 | 6:2,409,330-2,409,740 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g13336 | 6:2,410,289-2,410,699 | + | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g17841 | 6:2,411,428-2,412,749 | - | C1H6g10484 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g26766 | 6:2,412,783-2,413,085 | - | C1H6g06000 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g20170 | 6:2,415,673-2,419,060 | - | C1H6g16222 | CX6g044314 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| C2H6g19792 | 6:2,425,862-2,428,256 | - | C1H6g16022 | CX6g045401 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| C2H6g23161 | 6:2,429,699-2,437,037 | - | C1H6g13902 | CX6g043739 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| C2H6g04920 | 6:2,440,742-2,441,143 | - | - | CX6g042247 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| C2H6g21185 | 6:2,447,612-2,448,320 | + | C1H6g16824 | CX6g043772 | LOC_Os06g06610 | Os06g0161400 | - | Detail |
| C2H6g23055 | 6:2,459,795-2,461,268 | + | C1H6g25939 | CX6g045596 | LOC_Os06g06660 | Os06g0161800 | - | Detail |
| C2H6g19839 | 6:2,463,500-2,464,735 | + | C1H6g28340 | CX6g045596 | LOC_Os06g06670 | Os06g0161900 | - | Detail |
| C2H6g03972 | 6:2,466,564-2,467,051 | + | C1H6g28340 | - | - | - | - | Detail |
| C2H6g09639 | 6:2,467,292-2,468,545 | + | C1H6g29965 | CX6g045596 | LOC_Os06g06680 | Os06g0162100 | - | Detail |
| C2H6g11445 | 6:2,472,834-2,473,430 | + | C1H6g29965 | - | LOC_Os06g06580 | Os06g0161100 | - | Detail |
| C2H6g23738 | 6:2,491,525-2,493,444 | + | C1H6g05484 | CX6g045922 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| C2H6g27712 | 6:2,494,006-2,505,037 | - | C1H6g16792 | CX6g045009 | LOC_Os06g06730 | Os06g0162550 | OsZAS2 | Detail |
| C2H6g18003 | 6:2,506,220-2,508,521 | + | C1H6g20899 | CX6g044673 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| C2H6g28937 | 6:2,509,188-2,515,333 | - | C1H6g08500 | CX6g042913 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| C2H6g12221 | 6:2,520,562-2,521,083 | - | - | CX6g042202 | - | - | - | Detail |
| C2H6g12042 | 6:2,521,710-2,526,662 | - | C1H6g00041 | CX6g044205 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037894 | 5:24,035,153-24,036,646 | + | C1H5g30973 | C2H5g12970 | LOC_Os05g49930 | Os05g0574900 | OsSLRL2 | Detail |
| CX5g039269 | 5:24,044,741-24,045,208 | + | C1H5g16819 | C2H5g03271 | LOC_Os05g49960 | Os05g0576600 | - | Detail |
| CX5g039203 | 5:24,046,481-24,052,568 | + | C1H5g17869 | C2H5g26414 | LOC_Os05g49970 | Os05g0575300 | - | Detail |
| CX5g038622 | 5:24,054,698-24,057,372 | + | C1H5g06409 | C2H5g13759 | LOC_Os05g49980 | Os05g0575400 | - | Detail |
| CX5g040403 | 5:24,066,640-24,067,845 | - | C1H5g22837 | C2H5g20343 | LOC_Os05g50020 | Os05g0539300 | - | Detail |
| CX5g039044 | 5:24,084,521-24,085,684 | + | C1H5g15356 | C2H5g19912 | LOC_Os05g50080 | Os05g0576300 | - | Detail |
| CX5g038256 | 5:24,087,362-24,089,974 | - | C1H5g03069 | C2H5g01394 | LOC_Os05g50090 | Os05g0576500 | - | Detail |
| CX5g039524 | 5:24,091,418-24,091,948 | - | C1H5g16819 | C2H5g03271 | LOC_Os05g50100 | Os05g0576600 | - | Detail |
| CX5g039163 | 5:24,095,371-24,095,895 | - | C1H5g27061 | C2H5g25211 | LOC_Os05g50110 | Os05g0576700 | - | Detail |
| CX5g040507 | 5:24,098,579-24,103,329 | + | C1H5g01077 | C2H5g20547 | LOC_Os05g50120 | Os05g0576800 | OsMPK17 | Detail |
| CX5g036723 | 5:24,106,748-24,109,693 | + | C1H5g03330 | C2H5g06181 | LOC_Os05g50130 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| CX5g040604 | 5:24,110,603-24,112,874 | - | C1H5g30459 | C2H5g24762 | LOC_Os05g50140 | Os05g0576900 | - | Detail |
| CX5g039826 | 5:24,114,652-24,115,734 | + | C1H5g03603 | C2H5g04718 | LOC_Os07g39990 | Os05g0123100 | OsGT43A | Detail |
| CX5g037651 | 5:24,119,361-24,120,272 | - | C1H5g30015 | C2H5g28105 | LOC_Os05g50160 | Os05g0577100 | - | Detail |
| CX5g040119 | 5:24,126,772-24,131,388 | - | C1H5g15586 | C2H5g16560 | LOC_Os05g50170 | Os05g0577200 | - | Detail |
| CX5g040982 | 5:24,133,563-24,134,084 | - | C1H5g18973 | C2H5g18251 | LOC_Os05g50180 | Os05g0577500 | - | Detail |
| CX5g038642 | 5:24,136,031-24,139,088 | - | C1H5g07867 | C2H5g30115 | LOC_Os05g50190 | Os05g0577700 | - | Detail |
| CX5g037985 | 5:24,143,280-24,148,863 | - | C1H5g14939 | C2H5g07752 | LOC_Os05g50200 | Os05g0577800 | - | Detail |
| CX5g040371 | 5:24,149,791-24,154,521 | - | C1H5g25502 | C2H5g09946 | LOC_Os05g50210 | Os05g0577900 | - | Detail |
| CX5g036982 | 5:24,154,919-24,157,156 | + | C1H5g03913 | C2H5g10460 | LOC_Os05g50220 | Os05g0578000 | - | Detail |