| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g13821 | 5:19,293,517-19,296,595 | + | C1H5g25663 | CX5g040208 | LOC_Os05g39110 | Os05g0467300 | - | Detail |
| C2H5g22884 | 5:19,297,853-19,299,913 | + | C1H5g14944 | CX5g039101 | LOC_Os05g39120 | Os05g0467400 | - | Detail |
| C2H5g01596 | 5:19,303,265-19,307,233 | - | C1H5g21928 | CX5g040026 | LOC_Os05g39140 | Os05g0467600 | - | Detail |
| C2H5g19533 | 5:19,310,099-19,311,990 | + | C1H5g14390 | CX5g039101 | LOC_Os05g39150 | Os05g0467700 | - | Detail |
| C2H5g29716 | 5:19,314,528-19,317,718 | + | C1H5g15611 | CX5g039101 | LOC_Os05g39160 | Os05g0468100 | - | Detail |
| C2H5g16633 | 5:19,319,482-19,321,660 | + | C1H5g01223 | CX5g039101 | LOC_Os05g39180 | Os05g0468100 | - | Detail |
| C2H5g08374 | 5:19,323,556-19,325,638 | + | C1H5g19061 | CX5g039101 | LOC_Os05g39190 | Os05g0468200 | - | Detail |
| C2H5g06748 | 5:19,328,977-19,331,269 | + | C1H5g19061 | CX5g039101 | LOC_Os05g39200 | Os05g0468200 | - | Detail |
| C2H5g21881 | 5:19,335,010-19,337,330 | + | C1H5g10537 | CX5g039447 | LOC_Os05g39210 | Os05g0468400 | - | Detail |
| C2H5g02966 | 5:19,338,327-19,339,862 | - | C1H5g21975 | CX5g036720 | LOC_Os05g39220 | Os05g0468500 | - | Detail |
| C2H5g13151 | 5:19,342,137-19,350,468 | + | C1H5g17365 | CX5g040929 | LOC_Os05g39230 | Os05g0468600 | - | Detail |
| C2H5g02700 | 5:19,354,003-19,357,733 | + | C1H5g05340 | CX5g037578 | LOC_Os05g39240 | Os05g0468700 | OsAMT2;1 | Detail |
| C2H5g27707 | 5:19,357,954-19,358,552 | - | C1H5g00101 | CX5g040210 | LOC_Os05g39250 | Os05g0468800 | - | Detail |
| C2H5g13753 | 5:19,365,770-19,366,363 | + | C1H5g30545 | CX5g037066 | LOC_Os05g39260 | Os05g0468900 | - | Detail |
| C2H5g09443 | 5:19,376,441-19,376,650 | - | - | - | - | - | - | Detail |
| C2H5g18865 | 5:19,382,954-19,385,976 | + | C1H5g01899 | CX5g036944 | LOC_Os05g39310 | Os05g0469600 | Ospdc1 | Detail |
| C2H5g07982 | 5:19,389,405-19,390,007 | + | C1H5g17771 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C2H5g08481 | 5:19,390,026-19,391,728 | + | C1H5g02466 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C2H5g06883 | 5:19,392,592-19,395,652 | - | C1H5g04421 | CX5g040121 | LOC_Os05g39350 | Os05g0470000 | - | Detail |
| C2H5g13574 | 5:19,406,603-19,408,197 | + | - | CX5g040668 | LOC_Os05g39370 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037759 | 5:23,933,511-23,935,574 | - | C1H5g26987 | C2H5g20444 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| CX5g039397 | 5:23,937,139-23,940,130 | - | C1H5g12531 | C2H5g08690 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| CX5g036976 | 5:23,942,807-23,946,175 | + | C1H5g06006 | C2H5g17652 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| CX5g036857 | 5:23,946,862-23,952,509 | - | C1H5g18333 | C2H5g07346 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| CX5g039259 | 5:23,955,571-23,955,744 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040914 | 5:23,966,885-23,968,213 | - | C1H5g06253 | C2H5g23393 | LOC_Os05g43630 | Os05g0183900 | - | Detail |
| CX5g038953 | 5:23,968,663-23,970,097 | - | C1H5g19329 | C2H5g16280 | LOC_Os10g31120 | Os05g0227800 | - | Detail |
| CX5g039933 | 5:23,972,968-23,977,135 | + | C1H5g30361 | C2H5g13745 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| CX5g040236 | 5:23,978,427-23,978,840 | - | C1H5g18248 | C2H5g25143 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| CX5g037555 | 5:23,981,261-23,984,367 | - | C1H5g00854 | C2H5g09568 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| CX5g040047 | 5:23,986,708-23,990,993 | + | C1H5g11098 | C2H5g07066 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| CX5g037660 | 5:23,991,302-23,995,470 | - | C1H5g10056 | C2H5g06386 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| CX5g038298 | 5:23,999,175-24,000,493 | + | C1H5g18130 | C2H5g04324 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| CX5g038739 | 5:24,000,739-24,004,549 | - | C1H5g18110 | C2H5g11612 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| CX5g037745 | 5:24,008,487-24,008,945 | + | C1H5g16150 | C2H5g16314 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| CX5g037549 | 5:24,011,296-24,014,788 | - | C1H5g12972 | C2H5g21858 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| CX5g040904 | 5:24,017,080-24,019,059 | - | C1H5g25768 | C2H5g16147 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| CX5g039116 | 5:24,019,791-24,021,353 | - | C1H5g25442 | C2H5g14802 | LOC_Os05g49900 | Os05g0574600 | - | Detail |
| CX5g037295 | 5:24,024,094-24,026,506 | - | C1H5g28327 | C2H5g28664 | LOC_Os05g49910 | Os05g0574700 | - | Detail |
| CX5g038047 | 5:24,027,430-24,030,048 | + | C1H5g15373 | C2H5g08357 | LOC_Os05g49920 | Os05g0574800 | - | Detail |