| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17042 | 4:20,797,046-20,800,398 | - | C1H4g31403 | CX4g036343 | LOC_Os04g40650 | Os04g0482700 | - | Detail |
| C2H4g09234 | 4:20,801,204-20,805,683 | - | C1H4g18067 | CX4g032655 | LOC_Os04g40660 | Os04g0482800 | - | Detail |
| C2H4g06345 | 4:20,806,844-20,811,942 | - | C1H4g04900 | CX4g032113 | LOC_Os04g40670 | Os04g0482900 | - | Detail |
| C2H4g21173 | 4:20,815,477-20,817,018 | + | C1H4g26441 | CX4g035699 | LOC_Os04g40680 | Os04g0483000 | - | Detail |
| C2H4g26991 | 4:20,827,642-20,832,109 | + | C1H4g10284 | CX4g036074 | LOC_Os04g40700 | Os04g0483200 | - | Detail |
| C2H4g13170 | 4:20,832,265-20,838,730 | - | C1H4g11147 | CX4g035331 | LOC_Os04g40720 | Os04g0483400 | OsSUBSrP1 | Detail |
| C2H4g15487 | 4:20,840,358-20,843,372 | - | C1H4g14843 | CX4g031522 | LOC_Os04g40730 | Os04g0483500 | KCR1, OsKCR1, WSL3 | Detail |
| C2H4g03640 | 4:20,845,395-20,852,309 | - | C1H4g00579 | CX4g033297 | LOC_Os04g40740 | Os04g0483600 | - | Detail |
| C2H4g28314 | 4:20,861,023-20,862,867 | - | C1H4g22602 | CX4g032598 | LOC_Os04g40760 | Os04g0651600 | - | Detail |
| C2H4g03392 | 4:20,871,565-20,879,184 | + | C1H4g19344 | CX4g034516 | LOC_Os04g40830 | Os04g0484800 | - | Detail |
| C2H4g06907 | 4:20,879,589-20,882,951 | - | C1H4g05361 | CX4g032355 | LOC_Os04g40840 | Os04g0484900 | OsELP3 | Detail |
| C2H4g29472 | 4:20,883,277-20,885,991 | + | C1H4g09149 | CX4g035127 | LOC_Os04g40850 | Os04g0485000 | OsRpn7 | Detail |
| C2H4g14931 | 4:20,886,151-20,890,107 | - | C1H4g21128 | CX4g034685 | LOC_Os04g40860 | Os04g0485100 | - | Detail |
| C2H4g07215 | 4:20,894,500-20,897,610 | + | C1H4g16250 | CX4g032126 | LOC_Os04g40870 | Os04g0485200 | - | Detail |
| C2H4g19727 | 4:20,901,679-20,907,974 | + | C1H4g02206 | CX4g032384 | LOC_Os04g40874 | Os04g0485300 | - | Detail |
| C2H4g08090 | 4:20,902,491-20,910,357 | - | C1H4g05914 | CX4g033307 | LOC_Os04g40880 | Os04g0485400 | - | Detail |
| C2H4g07501 | 4:20,911,718-20,913,987 | + | C1H8g13693 | CX4g032119 | LOC_Os04g40900 | Os04g0485700 | - | Detail |
| C2H4g25528 | 4:20,915,296-20,918,861 | - | C1H4g23020 | CX4g031550 | LOC_Os04g40910 | Os04g0485800 | - | Detail |
| C2H4g07670 | 4:20,925,719-20,927,142 | + | C1H4g01634 | CX4g034598 | LOC_Os04g40920 | Os04g0486300 | - | Detail |
| C2H4g08395 | 4:20,928,040-20,932,453 | + | C1H4g05039 | CX4g034598 | LOC_Os04g40930 | Os04g0486400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037759 | 5:23,933,511-23,935,574 | - | C1H5g26987 | C2H5g20444 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| CX5g039397 | 5:23,937,139-23,940,130 | - | C1H5g12531 | C2H5g08690 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| CX5g036976 | 5:23,942,807-23,946,175 | + | C1H5g06006 | C2H5g17652 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| CX5g036857 | 5:23,946,862-23,952,509 | - | C1H5g18333 | C2H5g07346 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| CX5g039259 | 5:23,955,571-23,955,744 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040914 | 5:23,966,885-23,968,213 | - | C1H5g06253 | C2H5g23393 | LOC_Os05g43630 | Os05g0183900 | - | Detail |
| CX5g038953 | 5:23,968,663-23,970,097 | - | C1H5g19329 | C2H5g16280 | LOC_Os10g31120 | Os05g0227800 | - | Detail |
| CX5g039933 | 5:23,972,968-23,977,135 | + | C1H5g30361 | C2H5g13745 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| CX5g040236 | 5:23,978,427-23,978,840 | - | C1H5g18248 | C2H5g25143 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| CX5g037555 | 5:23,981,261-23,984,367 | - | C1H5g00854 | C2H5g09568 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| CX5g040047 | 5:23,986,708-23,990,993 | + | C1H5g11098 | C2H5g07066 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| CX5g037660 | 5:23,991,302-23,995,470 | - | C1H5g10056 | C2H5g06386 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| CX5g038298 | 5:23,999,175-24,000,493 | + | C1H5g18130 | C2H5g04324 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| CX5g038739 | 5:24,000,739-24,004,549 | - | C1H5g18110 | C2H5g11612 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| CX5g037745 | 5:24,008,487-24,008,945 | + | C1H5g16150 | C2H5g16314 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| CX5g037549 | 5:24,011,296-24,014,788 | - | C1H5g12972 | C2H5g21858 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| CX5g040904 | 5:24,017,080-24,019,059 | - | C1H5g25768 | C2H5g16147 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| CX5g039116 | 5:24,019,791-24,021,353 | - | C1H5g25442 | C2H5g14802 | LOC_Os05g49900 | Os05g0574600 | - | Detail |
| CX5g037295 | 5:24,024,094-24,026,506 | - | C1H5g28327 | C2H5g28664 | LOC_Os05g49910 | Os05g0574700 | - | Detail |
| CX5g038047 | 5:24,027,430-24,030,048 | + | C1H5g15373 | C2H5g08357 | LOC_Os05g49920 | Os05g0574800 | - | Detail |