| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g29423 | 11:23,547,568-23,548,309 | + | C1H11g06474 | CX11g012579 | LOC_Os11g44560 | Os11g0666100 | - | Detail |
| C2H11g28422 | 11:23,558,690-23,567,195 | + | C1H11g31038 | CX11g014770 | LOC_Os11g44560 | Os11g0667700 | - | Detail |
| C2H11g16444 | 11:23,598,574-23,600,570 | + | C1H11g13572 | CX11g014770 | LOC_Os11g44440 | Os11g0667700 | - | Detail |
| C2H11g14791 | 11:23,653,364-23,653,869 | + | C1H11g30139 | - | LOC_Os11g44600 | Os11g0668300 | - | Detail |
| C2H11g16013 | 11:23,677,066-23,678,552 | + | C1H11g03946 | CX11g014529 | LOC_Os11g44570 | Os11g0664133 | - | Detail |
| C2H11g00190 | 11:23,696,581-23,701,299 | + | C1H11g11980 | CX11g011573 | LOC_Os11g44600 | Os11g0668300 | - | Detail |
| C2H11g26573 | 11:23,702,367-23,703,055 | - | C1H11g00447 | CX11g011679 | - | - | - | Detail |
| C2H11g05220 | 11:23,706,918-23,708,132 | - | C1H11g21665 | CX11g014592 | LOC_Os11g44630 | Os11g0668650 | - | Detail |
| C2H11g12391 | 11:23,754,449-23,757,142 | + | C1H11g00851 | CX11g013988 | LOC_Os11g44660 | Os11g0668800 | OsRLCK349 | Detail |
| C2H11g13903 | 11:23,830,954-23,831,442 | + | C1H11g03521 | CX11g012285 | LOC_Os11g44800 | Os11g0670900 | - | Detail |
| C2H11g03237 | 11:23,841,357-23,842,061 | - | C1H11g03207 | CX11g011980 | - | Os11g0540600 | - | Detail |
| C2H11g16679 | 11:23,883,254-23,884,027 | + | C1H11g15400 | CX11g014187 | LOC_Os11g44420 | Os11g0666100 | - | Detail |
| C2H11g05077 | 11:23,930,498-23,931,119 | + | C1H11g20665 | CX11g013089 | - | Os11g0594000 | OsSTP28 | Detail |
| C2H11g05711 | 11:23,932,739-23,934,083 | + | C1H11g20975 | CX11g013325 | LOC_Os03g11900 | Os11g0594000 | OsSTP28 | Detail |
| C2H11g07931 | 11:23,946,483-23,950,369 | + | C1H11g18108 | CX11g014938 | LOC_Os11g44690 | Os11g0669200 | OsRLCK350 | Detail |
| C2H11g04907 | 11:23,952,400-23,958,273 | + | C1H11g30378 | CX11g011862 | LOC_Os11g44700 | Os11g0669100 | COG3 | Detail |
| C2H11g18937 | 11:23,960,274-23,963,639 | + | C1H11g10751 | CX11g011862 | LOC_Os11g44690 | Os11g0669200 | OsRLCK350 | Detail |
| C2H11g27132 | 11:24,001,820-24,007,544 | + | C1H11g30378 | CX11g011862 | LOC_Os11g44680 | Os11g0669100 | COG3 | Detail |
| C2H11g01187 | 11:24,029,463-24,031,977 | + | C1H11g26732 | CX11g014304 | LOC_Os11g44750 | Os11g0670100 | - | Detail |
| C2H11g19468 | 11:24,035,624-24,037,852 | + | C1H11g24253 | CX9g056877 | LOC_Os11g44790 | Os11g0670700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037759 | 5:23,933,511-23,935,574 | - | C1H5g26987 | C2H5g20444 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| CX5g039397 | 5:23,937,139-23,940,130 | - | C1H5g12531 | C2H5g08690 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| CX5g036976 | 5:23,942,807-23,946,175 | + | C1H5g06006 | C2H5g17652 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| CX5g036857 | 5:23,946,862-23,952,509 | - | C1H5g18333 | C2H5g07346 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| CX5g039259 | 5:23,955,571-23,955,744 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040914 | 5:23,966,885-23,968,213 | - | C1H5g06253 | C2H5g23393 | LOC_Os05g43630 | Os05g0183900 | - | Detail |
| CX5g038953 | 5:23,968,663-23,970,097 | - | C1H5g19329 | C2H5g16280 | LOC_Os10g31120 | Os05g0227800 | - | Detail |
| CX5g039933 | 5:23,972,968-23,977,135 | + | C1H5g30361 | C2H5g13745 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| CX5g040236 | 5:23,978,427-23,978,840 | - | C1H5g18248 | C2H5g25143 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| CX5g037555 | 5:23,981,261-23,984,367 | - | C1H5g00854 | C2H5g09568 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| CX5g040047 | 5:23,986,708-23,990,993 | + | C1H5g11098 | C2H5g07066 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| CX5g037660 | 5:23,991,302-23,995,470 | - | C1H5g10056 | C2H5g06386 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| CX5g038298 | 5:23,999,175-24,000,493 | + | C1H5g18130 | C2H5g04324 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| CX5g038739 | 5:24,000,739-24,004,549 | - | C1H5g18110 | C2H5g11612 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| CX5g037745 | 5:24,008,487-24,008,945 | + | C1H5g16150 | C2H5g16314 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| CX5g037549 | 5:24,011,296-24,014,788 | - | C1H5g12972 | C2H5g21858 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| CX5g040904 | 5:24,017,080-24,019,059 | - | C1H5g25768 | C2H5g16147 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| CX5g039116 | 5:24,019,791-24,021,353 | - | C1H5g25442 | C2H5g14802 | LOC_Os05g49900 | Os05g0574600 | - | Detail |
| CX5g037295 | 5:24,024,094-24,026,506 | - | C1H5g28327 | C2H5g28664 | LOC_Os05g49910 | Os05g0574700 | - | Detail |
| CX5g038047 | 5:24,027,430-24,030,048 | + | C1H5g15373 | C2H5g08357 | LOC_Os05g49920 | Os05g0574800 | - | Detail |