| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g25595 | 9:11,946,687-11,956,579 | - | C1H9g03905 | CX9g057906 | LOC_Os09g23760 | Os09g0402533 | - | Detail |
| C2H9g08460 | 9:11,961,058-11,965,290 | - | C1H9g17416 | CX9g056256 | LOC_Os09g23780 | Os09g0403000 | - | Detail |
| C2H9g10325 | 9:11,991,185-11,993,413 | - | C1H9g09430 | CX9g054957 | LOC_Os09g23820 | Os09g0403300 | CYP735A4 | Detail |
| C2H9g24241 | 9:12,070,492-12,074,440 | + | C1H9g24650 | CX9g055965 | LOC_Os09g24200 | Os09g0407200 | - | Detail |
| C2H9g02820 | 9:12,077,052-12,082,880 | - | C1H9g23904 | CX9g057203 | LOC_Os09g24210 | Os09g0407300 | - | Detail |
| C2H9g29912 | 9:12,088,819-12,097,627 | + | C1H9g02293 | CX9g055864 | LOC_Os09g24220 | Os09g0407600 | OsMSH6 | Detail |
| C2H9g01717 | 9:12,098,560-12,100,597 | - | C1H9g08629 | CX9g056314 | LOC_Os09g24230 | Os09g0407700 | - | Detail |
| C2H9g04820 | 9:12,105,365-12,110,209 | - | C1H9g08004 | CX9g055255 | LOC_Os09g24250 | Os09g0407900 | - | Detail |
| C2H9g21364 | 9:12,115,252-12,127,451 | + | C1H9g20631 | CX9g056605 | LOC_Os09g24260 | Os09g0408000 | - | Detail |
| C2H9g07349 | 9:12,146,594-12,150,689 | + | C1H9g14259 | CX10g008425 | LOC_Os09g24290 | Os09g0408300 | - | Detail |
| C2H9g01448 | 9:12,167,118-12,167,807 | + | C1H9g31260 | CX9g055135 | LOC_Os09g24310 | Os09g0408550 | - | Detail |
| C2H9g08954 | 9:12,168,443-12,171,174 | - | C1H9g05602 | CX9g058200 | LOC_Os09g24320 | Os09g0408600 | - | Detail |
| C2H9g03900 | 9:12,177,093-12,178,180 | + | C1H9g31476 | CX9g055752 | LOC_Os09g24330 | Os09g0551201 | SDK1 | Detail |
| C2H9g12250 | 9:12,185,495-12,186,697 | + | C1H9g18300 | CX9g057158 | LOC_Os09g24330 | Os09g0408900 | - | Detail |
| C2H9g10480 | 9:12,208,313-12,224,837 | + | C1H9g04735 | CX9g057897 | LOC_Os09g24440 | Os09g0410300 | TAF2 | Detail |
| C2H9g06736 | 9:12,226,374-12,234,026 | + | C1H9g12574 | CX9g055674 | - | Os09g0410400 | - | Detail |
| C2H9g10864 | 9:12,259,086-12,259,848 | + | C1H9g03911 | CX9g056790 | - | - | - | Detail |
| C2H9g24788 | 9:12,264,548-12,266,942 | - | C1H9g20900 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C2H9g22733 | 9:12,276,692-12,277,856 | + | C1H9g20141 | CX9g055159 | - | - | - | Detail |
| C2H9g26695 | 9:12,280,841-12,281,761 | - | C1H9g04476 | CX9g057630 | LOC_Os09g28820 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037759 | 5:23,933,511-23,935,574 | - | C1H5g26987 | C2H5g20444 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| CX5g039397 | 5:23,937,139-23,940,130 | - | C1H5g12531 | C2H5g08690 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| CX5g036976 | 5:23,942,807-23,946,175 | + | C1H5g06006 | C2H5g17652 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| CX5g036857 | 5:23,946,862-23,952,509 | - | C1H5g18333 | C2H5g07346 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| CX5g039259 | 5:23,955,571-23,955,744 | - | - | - | - | Os02g0188201 | - | Detail |
| CX5g040914 | 5:23,966,885-23,968,213 | - | C1H5g06253 | C2H5g23393 | LOC_Os05g43630 | Os05g0183900 | - | Detail |
| CX5g038953 | 5:23,968,663-23,970,097 | - | C1H5g19329 | C2H5g16280 | LOC_Os10g31120 | Os05g0227800 | - | Detail |
| CX5g039933 | 5:23,972,968-23,977,135 | + | C1H5g30361 | C2H5g13745 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| CX5g040236 | 5:23,978,427-23,978,840 | - | C1H5g18248 | C2H5g25143 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| CX5g037555 | 5:23,981,261-23,984,367 | - | C1H5g00854 | C2H5g09568 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| CX5g040047 | 5:23,986,708-23,990,993 | + | C1H5g11098 | C2H5g07066 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| CX5g037660 | 5:23,991,302-23,995,470 | - | C1H5g10056 | C2H5g06386 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| CX5g038298 | 5:23,999,175-24,000,493 | + | C1H5g18130 | C2H5g04324 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| CX5g038739 | 5:24,000,739-24,004,549 | - | C1H5g18110 | C2H5g11612 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| CX5g037745 | 5:24,008,487-24,008,945 | + | C1H5g16150 | C2H5g16314 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| CX5g037549 | 5:24,011,296-24,014,788 | - | C1H5g12972 | C2H5g21858 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| CX5g040904 | 5:24,017,080-24,019,059 | - | C1H5g25768 | C2H5g16147 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| CX5g039116 | 5:24,019,791-24,021,353 | - | C1H5g25442 | C2H5g14802 | LOC_Os05g49900 | Os05g0574600 | - | Detail |
| CX5g037295 | 5:24,024,094-24,026,506 | - | C1H5g28327 | C2H5g28664 | LOC_Os05g49910 | Os05g0574700 | - | Detail |
| CX5g038047 | 5:24,027,430-24,030,048 | + | C1H5g15373 | C2H5g08357 | LOC_Os05g49920 | Os05g0574800 | - | Detail |