| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g25576 | 9:12,777,935-12,778,156 | + | C1H9g13617 | CX9g056019 | LOC_Os09g25314 | Os09g0420700 | - | Detail |
| C2H9g18572 | 9:12,782,612-12,788,144 | - | C1H9g09470 | CX9g058181 | LOC_Os09g25330 | Os09g0420900 | - | Detail |
| C2H9g09588 | 9:12,804,426-12,808,292 | - | C1H9g26024 | CX9g055908 | LOC_Os09g25370 | Os09g0421100 | - | Detail |
| C2H9g10962 | 9:12,809,236-12,823,129 | - | C1H9g02641 | CX9g057078 | LOC_Os09g25380 | Os09g0421200 | - | Detail |
| C2H9g17055 | 9:12,823,984-12,828,188 | - | C1H9g29866 | CX9g056194 | LOC_Os09g25390 | Os09g0421300 | - | Detail |
| C2H9g14095 | 9:12,832,365-12,833,599 | + | C1H9g17171 | CX9g054998 | LOC_Os09g25410 | Os09g0421500 | - | Detail |
| C2H9g26024 | 9:12,833,957-12,836,657 | - | C1H9g16363 | CX9g055874 | LOC_Os09g25420 | Os09g0421600 | - | Detail |
| C2H9g20999 | 9:12,839,299-12,840,468 | - | C1H9g13057 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C2H9g15585 | 9:12,843,103-12,845,436 | - | C1H9g23603 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C2H9g18547 | 9:12,848,446-12,853,193 | - | C1H9g04652 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C2H9g29866 | 9:12,869,407-12,873,953 | + | C1H9g01940 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C2H9g13149 | 9:12,874,428-12,879,951 | - | C1H9g20433 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C2H9g06178 | 9:12,889,719-12,893,440 | + | C1H9g21248 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C2H9g01199 | 9:12,898,261-12,901,817 | + | C1H9g20875 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C2H9g29489 | 9:12,902,678-12,907,732 | + | C1H9g17046 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C2H9g01038 | 9:12,913,253-12,915,480 | + | C1H9g03392 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C2H9g24507 | 9:12,917,396-12,924,317 | - | C1H9g16029 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C2H9g10831 | 9:12,926,262-12,928,245 | + | C1H9g26575 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C2H9g19598 | 9:12,932,780-12,935,194 | + | C1H9g05792 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C2H9g25061 | 9:12,936,412-12,936,990 | + | C1H9g02235 | CX9g056085 | - | Os09g0423800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038841 | 5:23,741,035-23,741,523 | - | - | - | - | - | - | Detail |
| CX5g038165 | 5:23,743,904-23,747,031 | + | C1H5g00985 | C2H5g05526 | LOC_Os05g49300 | Os05g0568100 | - | Detail |
| CX5g036842 | 5:23,749,902-23,751,452 | + | C1H5g09631 | C2H5g04009 | LOC_Os05g49310 | Os05g0568200 | Os2R_MYB61 | Detail |
| CX5g039631 | 5:23,752,854-23,753,387 | - | C1H5g25001 | C2H5g09227 | LOC_Os05g49320 | Os05g0568300 | - | Detail |
| CX5g036834 | 5:23,754,186-23,754,542 | + | - | - | LOC_Os05g49330 | - | - | Detail |
| CX5g037330 | 5:23,757,651-23,758,151 | + | - | - | LOC_Os05g49340 | Os01g0661650 | - | Detail |
| CX5g038436 | 5:23,760,062-23,760,769 | + | C1H5g09281 | C2H5g10434 | LOC_Os05g49350 | Os05g0568600 | - | Detail |
| CX5g038804 | 5:23,763,520-23,764,218 | + | C1H5g06213 | C2H5g00779 | LOC_Os05g49370 | Os05g0568800 | - | Detail |
| CX5g039987 | 5:23,768,117-23,771,403 | - | C1H5g26494 | C2H5g19384 | LOC_Os05g49380 | Os05g0568900 | - | Detail |
| CX5g039827 | 5:23,773,141-23,774,532 | + | C1H5g12766 | C2H5g03690 | LOC_Os05g49400 | Os05g0569100 | - | Detail |
| CX5g040690 | 5:23,774,859-23,775,014 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX5g039675 | 5:23,776,997-23,777,389 | - | - | - | - | - | - | Detail |
| CX5g037902 | 5:23,778,890-23,779,840 | + | C1H5g17667 | C2H5g19196 | LOC_Os05g49410 | Os05g0569200 | - | Detail |
| CX5g036828 | 5:23,783,109-23,788,177 | + | C1H5g15556 | C2H5g28987 | LOC_Os05g49420 | Os05g0569300 | - | Detail |
| CX5g040312 | 5:23,791,986-23,794,113 | + | C1H5g04196 | C2H5g03335 | LOC_Os05g49430 | Os05g0569400 | - | Detail |
| CX5g037007 | 5:23,794,704-23,795,512 | + | C1H5g30048 | C2H5g15224 | LOC_Os05g49440 | Os05g0569500 | - | Detail |
| CX5g037778 | 5:23,800,978-23,801,697 | + | C1H11g02939 | C2H5g09955 | LOC_Os12g36430 | - | - | Detail |
| CX5g040138 | 5:23,806,915-23,808,459 | - | C1H5g12766 | C2H5g03690 | LOC_Os05g49450 | Os05g0569100 | - | Detail |
| CX5g040294 | 5:23,809,898-23,814,811 | - | C1H5g08515 | C2H5g07371 | LOC_Os05g49520 | Os05g0569700 | - | Detail |
| CX5g037998 | 5:23,815,326-23,816,390 | - | C1H8g13722 | C2H5g10887 | LOC_Os05g49470 | Os05g0569800 | - | Detail |