| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02805 | 3:8,495,411-8,498,787 | + | C2H3g19709 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C1H3g19384 | 3:8,501,589-8,503,927 | + | C2H3g01163 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C1H3g05247 | 3:8,508,143-8,509,087 | - | C2H3g30239 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C1H3g09869 | 3:8,510,401-8,517,214 | - | C2H3g10844 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C1H3g20489 | 3:8,518,066-8,520,873 | - | C2H3g22572 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C1H3g05953 | 3:8,528,301-8,530,820 | + | C2H3g23238 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C1H3g23808 | 3:8,531,055-8,537,416 | - | C2H3g13223 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C1H3g08368 | 3:8,542,023-8,546,702 | - | C2H3g28841 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C1H3g04312 | 3:8,549,633-8,551,996 | + | C2H3g02883 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g07058 | 3:8,557,281-8,559,581 | + | C2H3g04384 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g16432 | 3:8,567,232-8,573,375 | - | - | CX3g026382 | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| C1H3g15208 | 3:8,591,799-8,593,016 | + | C2H3g12675 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C1H3g13015 | 3:8,593,398-8,595,902 | - | C2H3g17220 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C1H3g25350 | 3:8,596,431-8,600,838 | + | C2H3g11550 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C1H3g12499 | 3:8,600,406-8,605,326 | - | C2H3g03924 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C1H3g23272 | 3:8,607,231-8,611,124 | - | C2H5g03493 | CX3g030233 | LOC_Os07g15980 | Os05g0193800 | - | Detail |
| C1H3g00300 | 3:8,616,097-8,616,946 | - | - | - | - | - | - | Detail |
| C1H3g26286 | 3:8,619,041-8,621,151 | - | C2H3g13775 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| C1H3g04825 | 3:8,622,727-8,625,392 | + | C2H3g16412 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C1H3g31389 | 3:8,626,250-8,628,390 | - | C2H3g25427 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037055 | 5:23,619,762-23,625,024 | + | C1H5g26074 | C2H5g18842 | LOC_Os05g49130 | Os05g0566300 | - | Detail |
| CX5g041068 | 5:23,625,979-23,630,545 | - | C1H5g01748 | C2H5g13359 | LOC_Os05g49140 | Os05g0566400 | OsMAPK20-5 | Detail |
| CX5g037085 | 5:23,638,947-23,640,704 | - | C1H5g28958 | C2H5g12336 | LOC_Os05g49150 | Os05g0566500 | - | Detail |
| CX5g039816 | 5:23,642,392-23,643,959 | - | C1H5g22715 | C2H5g15036 | LOC_Os05g49160 | Os05g0566600 | - | Detail |
| CX5g038155 | 5:23,647,459-23,649,381 | - | C1H5g26245 | C2H5g13087 | LOC_Os05g49170 | Os05g0566800 | Oscor413-tm1 | Detail |
| CX5g037456 | 5:23,649,949-23,650,427 | + | - | - | - | - | - | Detail |
| CX5g037207 | 5:23,654,413-23,654,613 | + | - | - | - | - | - | Detail |
| CX5g040745 | 5:23,654,869-23,662,302 | + | C1H5g19913 | C2H5g22084 | LOC_Os05g49180 | Os05g0566900 | - | Detail |
| CX5g039784 | 5:23,666,417-23,671,551 | + | C1H5g06369 | C2H5g01258 | LOC_Os05g49200 | Os05g0567100 | - | Detail |
| CX5g037082 | 5:23,673,447-23,675,984 | + | C1H5g12413 | C2H5g08767 | LOC_Os05g49210 | Os05g0567200 | - | Detail |
| CX5g038906 | 5:23,677,254-23,679,665 | - | C1H5g25066 | C2H5g14170 | LOC_Os05g49220 | Os05g0567300 | WSL6 | Detail |
| CX5g040336 | 5:23,689,178-23,693,440 | + | C1H5g11758 | C2H5g01392 | LOC_Os05g49230 | Os05g0567400 | - | Detail |
| CX5g041097 | 5:23,697,681-23,697,938 | + | C1H5g12293 | C2H5g03563 | LOC_Os05g49240 | Os05g0567600 | - | Detail |
| CX5g040334 | 5:23,699,894-23,700,778 | - | C1H5g15392 | C2H5g24128 | LOC_Os05g49250 | Os05g0567500 | - | Detail |
| CX5g038777 | 5:23,702,619-23,705,968 | - | C1H5g01573 | C2H5g13073 | LOC_Os05g51760 | Os05g0252801 | - | Detail |
| CX5g040684 | 5:23,707,434-23,711,357 | + | C1H5g07754 | C2H5g00173 | LOC_Os05g49260 | Os05g0567700 | OsERD3 | Detail |
| CX5g040065 | 5:23,713,171-23,717,326 | + | C1H5g00633 | C2H5g11854 | LOC_Os05g49270 | Os05g0567800 | OsERD4 | Detail |
| CX5g036717 | 5:23,720,031-23,720,923 | - | C1H5g22150 | C2H5g22796 | LOC_Os05g49280 | Os05g0567900 | - | Detail |
| CX5g037822 | 5:23,729,327-23,729,512 | - | - | - | - | - | - | Detail |
| CX5g037874 | 5:23,732,510-23,734,069 | - | C1H5g27105 | C2H5g07754 | LOC_Os05g49290 | Os05g0568000 | - | Detail |