| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09834 | 1:9,111,388-9,111,723 | + | C2H1g08442 | - | - | - | - | Detail |
| C1H1g31050 | 1:9,113,543-9,122,637 | + | C2H1g22354 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C1H1g09627 | 1:9,124,603-9,125,372 | - | C2H1g13905 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C1H1g10680 | 1:9,132,796-9,135,738 | + | C2H1g17254 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C1H1g13588 | 1:9,141,749-9,142,612 | - | C2H1g07308 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C1H1g17641 | 1:9,154,576-9,155,375 | - | C2H1g20440 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C1H1g06479 | 1:9,163,852-9,166,083 | - | C2H1g10789 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C1H1g05697 | 1:9,211,047-9,214,437 | + | C2H1g03219 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C1H1g18723 | 1:9,219,612-9,223,119 | - | C2H1g23388 | CX1g006989 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g02909 | 1:9,238,369-9,239,842 | - | C2H1g25947 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C1H1g25972 | 1:9,241,032-9,242,334 | - | C2H1g12260 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C1H1g02936 | 1:9,244,036-9,247,610 | + | C2H1g13264 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C1H1g02001 | 1:9,260,143-9,263,439 | + | C2H1g18493 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C1H1g26094 | 1:9,285,715-9,286,050 | + | C2H1g16973 | CX1g002314 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| C1H1g20358 | 1:9,288,357-9,288,734 | - | C2H1g04657 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g26001 | 1:9,289,217-9,289,708 | - | C2H1g10428 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g01375 | 1:9,324,450-9,324,810 | - | C2H1g21581 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C1H1g15975 | 1:9,340,737-9,341,039 | - | C2H1g03324 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C1H1g27658 | 1:9,376,678-9,383,015 | + | C2H1g00434 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C1H1g31040 | 1:9,410,229-9,411,702 | - | C2H1g15794 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002261 | 1:23,572,581-23,573,950 | - | C1H1g21740 | C2H1g24945 | LOC_Os01g46400 | Os01g0652800 | - | Detail |
| CX1g003955 | 1:23,583,165-23,584,450 | - | C1H1g26083 | C2H1g19675 | LOC_Os01g46410 | Os01g0653100 | OsXyBAT2 | Detail |
| CX1g005407 | 1:23,588,618-23,590,072 | + | - | - | LOC_Os01g46430 | Os01g0653200 | - | Detail |
| CX1g002811 | 1:23,591,559-23,591,795 | - | C1H1g09813 | C2H1g26916 | LOC_Os01g46440 | Os01g0653300 | - | Detail |
| CX1g006661 | 1:23,607,499-23,619,439 | - | C1H1g28754 | C2H1g07801 | LOC_Os01g46510 | Os01g0653800 | - | Detail |
| CX1g004582 | 1:23,627,022-23,631,815 | + | C1H7g12901 | C2H3g15265 | - | - | - | Detail |
| CX1g006750 | 1:23,669,431-23,676,016 | + | C1H1g31131 | C2H1g26396 | LOC_Os01g46570 | Os01g0654100 | - | Detail |
| CX1g002113 | 1:23,678,221-23,682,889 | - | C1H1g11738 | C2H1g01055 | LOC_Os01g46590 | Os01g0654200 | - | Detail |
| CX1g004232 | 1:23,682,801-23,686,737 | + | C1H1g07135 | C2H1g00478 | LOC_Os01g46580 | Os01g0654300 | - | Detail |
| CX1g000507 | 1:23,687,280-23,687,537 | - | - | C2H1g09838 | LOC_Os01g46600 | Os01g0654400 | - | Detail |
| CX1g002075 | 1:23,688,523-23,692,385 | - | C1H1g04619 | C2H1g09838 | LOC_Os01g46610 | Os01g0654500 | - | Detail |
| CX1g003407 | 1:23,693,605-23,693,772 | - | - | - | - | - | - | Detail |
| CX1g005644 | 1:23,696,231-23,697,044 | - | C1H1g23889 | C2H1g17869 | LOC_Os01g46620 | - | - | Detail |
| CX1g000702 | 1:23,738,310-23,745,462 | + | C1H1g24345 | C2H1g00999 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| CX1g003368 | 1:23,748,431-23,754,304 | - | C1H1g19947 | C2H1g28065 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| CX1g005157 | 1:23,774,850-23,782,383 | + | C1H1g06509 | C2H1g10347 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| CX1g001306 | 1:23,793,456-23,798,454 | + | C1H1g10344 | C2H1g01219 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| CX1g006553 | 1:23,800,445-23,800,780 | - | - | - | LOC_Os01g46790 | Os01g0656300 | - | Detail |
| CX1g006460 | 1:23,806,843-23,807,982 | - | C1H1g15601 | C2H1g14070 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| CX1g005546 | 1:23,821,236-23,828,109 | - | C1H1g28624 | C2H1g24475 | LOC_Os01g46810 | Os01g0656600 | - | Detail |