| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g036692 | 5:23,497,155-23,497,976 | + | C1H5g24831 | C2H5g26586 | LOC_Os05g48900 | Os05g0563600 | - | Detail |
| CX5g040695 | 5:23,501,040-23,501,429 | - | - | - | - | - | - | Detail |
| CX5g038036 | 5:23,512,680-23,515,959 | - | C1H5g01891 | C2H5g30565 | LOC_Os05g48940 | Os05g0564000 | - | Detail |
| CX5g040225 | 5:23,524,599-23,525,516 | + | C1H5g29642 | C2H5g04888 | LOC_Os05g48960 | Os05g0564200 | - | Detail |
| CX5g038798 | 5:23,532,688-23,535,357 | + | C1H5g01424 | C2H5g15150 | LOC_Os05g48970 | Os05g0564300 | - | Detail |
| CX5g037380 | 5:23,534,865-23,535,384 | - | - | C2H5g16098 | - | Os05g0564350 | - | Detail |
| CX5g039483 | 5:23,536,449-23,537,892 | - | C1H5g14301 | C2H5g21685 | LOC_Os05g48980 | Os05g0564400 | - | Detail |
| CX5g036954 | 5:23,545,922-23,550,565 | + | C1H5g26322 | C2H5g04875 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| CX5g040209 | 5:23,553,803-23,554,636 | - | C1H5g22284 | C2H5g03360 | LOC_Os05g49010 | Os05g0564700 | - | Detail |
| CX5g037646 | 5:23,557,363-23,561,636 | + | C1H5g09043 | C2H5g20403 | LOC_Os05g49030 | Os05g0565000 | - | Detail |
| CX5g038379 | 5:23,565,212-23,566,399 | + | C1H5g09274 | C2H5g24526 | LOC_Os05g49040 | Os05g0565100 | - | Detail |
| CX5g040804 | 5:23,566,772-23,569,427 | + | C1H5g19442 | C2H5g06163 | LOC_Os05g49050 | Os05g0565200 | - | Detail |
| CX5g038249 | 5:23,572,169-23,574,533 | - | C1H5g17900 | C2H5g13806 | - | - | - | Detail |
| CX5g039855 | 5:23,576,476-23,578,932 | - | C1H5g08734 | C2H5g19958 | LOC_Os05g49060 | Os05g0565400 | - | Detail |
| CX5g040924 | 5:23,579,721-23,580,659 | - | C1H5g23266 | C2H5g07466 | LOC_Os05g49070 | Os05g0565500 | - | Detail |
| CX5g037715 | 5:23,581,016-23,581,426 | - | C1H5g16562 | C2H5g00600 | LOC_Os05g49080 | Os05g0565701 | - | Detail |
| CX5g038925 | 5:23,583,602-23,584,099 | - | - | - | - | - | - | Detail |
| CX5g039821 | 5:23,601,974-23,604,941 | + | C1H5g03208 | C2H5g29804 | LOC_Os05g49100 | Os05g0565900 | - | Detail |
| CX5g036693 | 5:23,612,375-23,617,840 | + | C1H5g11149 | C2H5g02921 | LOC_Os05g49120 | Os05g0566200 | - | Detail |
| CX5g037594 | 5:23,618,674-23,618,871 | - | - | - | - | - | - | Detail |