| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04603 | 1:5,989,600-5,994,298 | - | C2H1g00939 | - | - | - | - | Detail |
| C1H1g10595 | 1:6,040,587-6,043,241 | - | C2H1g17446 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C1H1g28759 | 1:6,043,736-6,045,126 | + | C2H1g06705 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C1H1g07004 | 1:6,046,920-6,049,789 | + | C2H1g14688 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C1H1g12177 | 1:6,051,552-6,053,195 | - | C2H1g11914 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C1H1g07815 | 1:6,068,874-6,071,925 | + | C2H1g03625 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C1H1g11599 | 1:6,093,803-6,095,860 | - | C2H1g01358 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C1H1g06137 | 1:6,103,875-6,111,085 | + | C2H1g06869 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C1H1g01658 | 1:6,112,431-6,119,238 | + | C2H1g08071 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C1H1g10876 | 1:6,119,514-6,123,943 | + | C2H1g21338 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C1H1g09440 | 1:6,125,263-6,127,401 | - | C2H1g20462 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C1H1g18546 | 1:6,128,365-6,130,365 | - | C2H1g08221 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C1H1g06023 | 1:6,184,979-6,187,554 | + | C2H1g26314 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C1H1g23194 | 1:6,188,433-6,193,837 | - | C2H1g13868 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C1H1g24866 | 1:6,196,677-6,202,642 | + | C2H1g02547 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C1H1g15047 | 1:6,208,060-6,210,523 | + | C2H1g29977 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C1H1g31834 | 1:6,225,761-6,226,951 | + | C2H1g09030 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C1H1g16770 | 1:6,242,041-6,248,766 | + | C2H1g01170 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C1H1g09261 | 1:6,249,653-6,250,603 | + | C2H1g01170 | CX1g003495 | LOC_Os01g15700 | Os01g0527900 | - | Detail |
| C1H1g17285 | 1:6,261,105-6,265,913 | + | C2H1g13949 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040994 | 5:23,349,601-23,351,660 | - | C1H5g10477 | C2H5g04171 | LOC_Os05g48660 | Os05g0560300 | - | Detail |
| CX5g040506 | 5:23,354,973-23,360,604 | + | C1H5g07983 | C2H5g23278 | LOC_Os05g48670 | Os05g0560400 | - | Detail |
| CX5g041006 | 5:23,361,160-23,361,503 | - | C1H5g15622 | C2H5g11774 | LOC_Os05g48680 | Os05g0560500 | - | Detail |
| CX5g039073 | 5:23,364,818-23,365,858 | + | C1H5g18490 | C2H5g07077 | LOC_Os05g48690 | Os05g0560600 | - | Detail |
| CX5g037700 | 5:23,376,719-23,378,271 | - | C1H5g04118 | C2H5g25068 | LOC_Os05g48700 | Os05g0560900 | OsGA2ox8 | Detail |
| CX5g037256 | 5:23,397,238-23,397,465 | + | C1H5g06450 | C2H5g27839 | LOC_Os05g48740 | Os05g0561400 | - | Detail |
| CX5g036713 | 5:23,398,235-23,401,181 | - | C1H5g19616 | C2H5g17404 | LOC_Os05g48750 | Os05g0561500 | - | Detail |
| CX5g037464 | 5:23,406,111-23,409,519 | + | C1H5g06337 | C2H5g28708 | LOC_Os05g48760 | Os05g0561600 | - | Detail |
| CX5g040205 | 5:23,412,283-23,415,362 | - | C1H5g29811 | C2H5g03536 | LOC_Os05g48790 | Os05g0562000 | - | Detail |
| CX5g039207 | 5:23,416,656-23,416,805 | - | - | - | - | - | - | Detail |
| CX5g037282 | 5:23,422,193-23,424,706 | - | C1H5g21574 | C2H5g13005 | LOC_Os05g48800 | Os05g0562200 | - | Detail |
| CX5g038099 | 5:23,426,424-23,428,199 | - | C1H5g16970 | C2H5g02917 | LOC_Os05g48810 | Os05g0562300 | - | Detail |
| CX5g039085 | 5:23,429,390-23,439,834 | - | C1H5g24863 | C2H5g23462 | LOC_Os05g48820 | Os05g0562400 | - | Detail |
| CX5g039144 | 5:23,442,519-23,443,241 | - | C1H5g03290 | C2H5g25280 | LOC_Os05g48840 | Os05g0562800 | - | Detail |
| CX5g037488 | 5:23,452,363-23,453,602 | + | C1H5g26594 | C2H5g28682 | LOC_Os05g48850 | Os05g0563000 | OsSND2 | Detail |
| CX5g039932 | 5:23,454,264-23,461,176 | - | C1H5g29749 | C2H5g09501 | LOC_Os05g48855 | Os05g0563050 | - | Detail |
| CX5g037643 | 5:23,470,252-23,470,449 | + | - | - | - | - | - | Detail |
| CX5g039766 | 5:23,480,742-23,485,444 | + | C1H5g10966 | C2H5g20802 | LOC_Os05g48870 | Os05g0563400 | - | Detail |
| CX5g037148 | 5:23,486,578-23,488,965 | - | C1H5g01496 | C2H5g27189 | LOC_Os05g48880 | Os05g0563500 | OsMMS21 | Detail |
| CX5g036766 | 5:23,492,982-23,493,737 | + | C1H5g19054 | C2H5g22988 | LOC_Os05g48890 | Os05g0563550 | - | Detail |