| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23511 | 1:19,802,539-19,808,054 | + | C1H1g22058 | CX1g001079 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C2H1g23392 | 1:19,864,831-19,868,195 | + | C1H1g30169 | CX1g004267 | LOC_Os01g39580 | Os01g0577300 | PSH1, Rb2 | Detail |
| C2H1g00498 | 1:19,879,386-19,882,883 | - | C1H1g25385 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C2H1g08618 | 1:19,897,489-19,898,531 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g04424 | 1:19,899,125-19,902,478 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g11258 | 1:19,906,084-19,909,922 | - | C1H1g20612 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C2H1g04472 | 1:19,912,609-19,914,349 | + | C1H1g26503 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C2H1g18851 | 1:19,916,240-19,918,008 | + | C1H1g02081 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C2H1g09591 | 1:19,965,452-19,968,345 | + | C1H1g21250 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C2H1g01010 | 1:19,973,667-19,975,999 | + | C1H1g07602 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C2H1g23706 | 1:19,976,922-19,980,018 | - | C1H1g16386 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g07845 | 1:19,980,871-19,982,006 | + | C1H1g01467 | CX1g003139 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g09319 | 1:19,984,976-19,988,136 | - | C1H1g21549 | CX1g000391 | LOC_Os01g39800 | Os01g0580000 | - | Detail |
| C2H1g11799 | 1:19,989,590-19,995,302 | + | C1H1g25713 | CX1g006764 | LOC_Os01g39810 | Os01g0580100 | - | Detail |
| C2H1g14347 | 1:20,009,000-20,015,009 | + | C1H1g21126 | CX1g007091 | LOC_Os01g39830 | Os01g0580200 | - | Detail |
| C2H1g28048 | 1:20,014,913-20,016,892 | - | - | CX1g004854 | LOC_Os01g39840 | Os01g0580300 | - | Detail |
| C2H1g10202 | 1:20,037,484-20,038,729 | + | C1H1g08752 | CX1g001278 | LOC_Os01g39860 | Os01g0580500 | ACO7, OsACO7 | Detail |
| C2H1g22352 | 1:20,045,704-20,051,087 | - | C1H1g22394 | CX1g003562 | LOC_Os01g39890 | Os01g0580800 | - | Detail |
| C2H1g01027 | 1:20,070,536-20,074,539 | + | C1H1g15496 | CX1g003223 | LOC_Os01g39960 | Os01g0581300 | OsLCYe | Detail |
| C2H1g16645 | 1:20,075,082-20,077,784 | + | C1H1g29026 | CX1g001920 | LOC_Os01g39970 | Os01g0581400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038902 | 5:22,532,385-22,533,593 | - | C1H5g21489 | C2H5g24441 | LOC_Os05g46390 | Os05g0540600 | - | Detail |
| CX5g039412 | 5:22,537,780-22,543,362 | + | C1H5g06562 | C2H5g13798 | LOC_Os05g46395 | Os05g0541700 | - | Detail |
| CX5g039337 | 5:22,545,206-22,545,397 | - | C1H5g30366 | C2H5g16362 | - | Os05g0541750 | - | Detail |
| CX5g040694 | 5:22,547,363-22,548,237 | + | C1H5g29960 | C2H5g26824 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| CX5g039692 | 5:22,548,810-22,550,348 | - | C1H5g10948 | C2H5g22825 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| CX5g039049 | 5:22,551,298-22,554,608 | - | C1H5g24953 | C2H5g27157 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| CX5g040991 | 5:22,555,164-22,557,952 | - | C1H5g29646 | C2H5g28898 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| CX5g040398 | 5:22,560,791-22,564,059 | - | C1H5g28336 | C2H5g10686 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| CX5g039111 | 5:22,574,558-22,575,527 | + | C1H5g09305 | C2H5g20940 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| CX5g038812 | 5:22,578,229-22,582,955 | + | C1H5g16366 | C2H5g28006 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| CX5g036843 | 5:22,584,538-22,584,870 | + | C1H5g17509 | C2H5g00090 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| CX5g038839 | 5:22,587,288-22,589,802 | + | C1H5g04581 | C2H5g29209 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| CX5g037613 | 5:22,590,243-22,592,505 | + | C1H5g22788 | C2H5g29484 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| CX5g040487 | 5:22,594,659-22,595,692 | + | C1H5g21931 | C2H5g09269 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| CX5g038871 | 5:22,599,196-22,601,915 | - | C1H5g12205 | C2H5g29215 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| CX5g038262 | 5:22,603,091-22,605,764 | + | C1H5g11939 | C2H5g26031 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| CX5g036803 | 5:22,607,701-22,610,229 | + | C1H5g08116 | C2H5g16707 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| CX5g038659 | 5:22,611,353-22,614,411 | - | C1H5g14558 | C2H5g01982 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| CX5g038075 | 5:22,618,473-22,619,551 | + | C1H5g03603 | C2H5g04718 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| CX5g040628 | 5:22,635,016-22,636,168 | + | C1H5g29668 | C2H5g18850 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |