| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038902 | 5:22,532,385-22,533,593 | - | C1H5g21489 | C2H5g24441 | LOC_Os05g46390 | Os05g0540600 | - | Detail |
| CX5g039412 | 5:22,537,780-22,543,362 | + | C1H5g06562 | C2H5g13798 | LOC_Os05g46395 | Os05g0541700 | - | Detail |
| CX5g039337 | 5:22,545,206-22,545,397 | - | C1H5g30366 | C2H5g16362 | - | Os05g0541750 | - | Detail |
| CX5g040694 | 5:22,547,363-22,548,237 | + | C1H5g29960 | C2H5g26824 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| CX5g039692 | 5:22,548,810-22,550,348 | - | C1H5g10948 | C2H5g22825 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| CX5g039049 | 5:22,551,298-22,554,608 | - | C1H5g24953 | C2H5g27157 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| CX5g040991 | 5:22,555,164-22,557,952 | - | C1H5g29646 | C2H5g28898 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| CX5g040398 | 5:22,560,791-22,564,059 | - | C1H5g28336 | C2H5g10686 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| CX5g039111 | 5:22,574,558-22,575,527 | + | C1H5g09305 | C2H5g20940 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| CX5g038812 | 5:22,578,229-22,582,955 | + | C1H5g16366 | C2H5g28006 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| CX5g036843 | 5:22,584,538-22,584,870 | + | C1H5g17509 | C2H5g00090 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| CX5g038839 | 5:22,587,288-22,589,802 | + | C1H5g04581 | C2H5g29209 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| CX5g037613 | 5:22,590,243-22,592,505 | + | C1H5g22788 | C2H5g29484 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| CX5g040487 | 5:22,594,659-22,595,692 | + | C1H5g21931 | C2H5g09269 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| CX5g038871 | 5:22,599,196-22,601,915 | - | C1H5g12205 | C2H5g29215 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| CX5g038262 | 5:22,603,091-22,605,764 | + | C1H5g11939 | C2H5g26031 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| CX5g036803 | 5:22,607,701-22,610,229 | + | C1H5g08116 | C2H5g16707 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| CX5g038659 | 5:22,611,353-22,614,411 | - | C1H5g14558 | C2H5g01982 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| CX5g038075 | 5:22,618,473-22,619,551 | + | C1H5g03603 | C2H5g04718 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| CX5g040628 | 5:22,635,016-22,636,168 | + | C1H5g29668 | C2H5g18850 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |