| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g08402 | 3:2,768,021-2,772,193 | - | C2H3g18282 | CX3g030115 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C1H3g27159 | 3:2,772,594-2,774,096 | + | C2H3g21729 | CX3g028779 | LOC_Os03g13230 | Os03g0158900 | - | Detail |
| C1H3g28868 | 3:2,774,231-2,777,881 | - | C2H3g27396 | CX3g025128 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C1H3g19166 | 3:2,781,154-2,784,264 | + | C2H3g05214 | CX3g026196 | LOC_Os03g06330 | Os03g0159100 | - | Detail |
| C1H3g00562 | 3:2,785,161-2,791,188 | + | C2H3g05736 | CX3g029258 | LOC_Os03g06340 | Os03g0159200 | - | Detail |
| C1H3g03543 | 3:2,794,083-2,794,760 | - | C2H3g02146 | CX3g031270 | LOC_Os03g06350 | Os03g0159400 | - | Detail |
| C1H3g19003 | 3:2,799,427-2,800,430 | - | C2H3g07500 | CX3g027894 | LOC_Os03g06360 | Os03g0159600 | - | Detail |
| C1H3g22077 | 3:2,801,035-2,802,655 | + | C2H3g25960 | CX3g031117 | LOC_Os03g06370 | Os03g0159700 | OsNBL3 | Detail |
| C1H3g26257 | 3:2,806,639-2,807,112 | - | C2H3g24140 | CX3g025627 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| C1H3g14921 | 3:2,811,348-2,818,298 | + | C2H3g08821 | CX3g025658 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| C1H3g04551 | 3:2,818,804-2,821,602 | + | C2H3g02952 | - | - | - | - | Detail |
| C1H3g16143 | 3:2,822,745-2,823,038 | - | C2H3g01208 | CX3g027015 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| C1H3g24862 | 3:2,825,828-2,830,120 | - | C2H3g27894 | CX3g030159 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| C1H3g27076 | 3:2,839,115-2,842,159 | - | C2H3g10921 | CX3g027024 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| C1H3g12946 | 3:2,850,274-2,850,882 | - | C2H3g17145 | CX3g031001 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| C1H3g01001 | 3:2,860,192-2,860,646 | + | C2H3g18147 | - | LOC_Os03g06490 | Os03g0161000 | - | Detail |
| C1H3g27407 | 3:2,860,947-2,861,232 | + | C2H3g23882 | CX3g025715 | - | - | - | Detail |
| C1H3g20415 | 3:2,863,645-2,864,036 | + | C2H3g19291 | CX3g025715 | - | - | - | Detail |
| C1H3g11018 | 3:2,866,355-2,868,463 | + | C2H3g21331 | - | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C1H3g11682 | 3:2,868,966-2,877,261 | + | C2H3g05410 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039666 | 5:22,325,545-22,326,408 | - | C1H5g15501 | C2H5g22595 | LOC_Os05g45890 | Os05g0535500 | AET1 | Detail |
| CX5g040734 | 5:22,332,062-22,336,254 | + | C1H5g17794 | C2H5g21268 | LOC_Os05g45980 | Os05g0552900 | OsMAP65-3.2 | Detail |
| CX5g039351 | 5:22,338,032-22,339,168 | + | C1H5g04244 | - | - | - | - | Detail |
| CX5g038645 | 5:22,340,882-22,342,540 | - | C1H5g22851 | C2H5g21034 | LOC_Os05g45990 | Os05g0536800 | - | Detail |
| CX5g041126 | 5:22,346,549-22,348,280 | + | C1H5g14506 | C2H5g02348 | LOC_Os05g46000 | Os05g0536900 | - | Detail |
| CX5g037099 | 5:22,361,419-22,362,436 | + | C1H5g15585 | C2H5g09611 | LOC_Os05g46020 | Os05g0537100 | OsWRKY7 | Detail |
| CX5g038037 | 5:22,366,816-22,383,817 | + | C1H5g21573 | C2H5g26816 | LOC_Os05g46030 | Os05g0537200 | - | Detail |
| CX5g037558 | 5:22,384,528-22,387,113 | - | C1H5g14803 | C2H5g28952 | LOC_Os05g46040 | Os05g0537400 | OsPP2C50 | Detail |
| CX5g039402 | 5:22,432,747-22,439,259 | - | C1H5g08208 | C2H5g03604 | LOC_Os05g46200 | Os05g0539400 | OsBGAL9 | Detail |
| CX5g037335 | 5:22,441,599-22,444,668 | + | C1H5g30453 | C2H5g03462 | LOC_Os05g46210 | Os05g0539500 | - | Detail |
| CX5g038955 | 5:22,445,537-22,448,306 | + | C1H5g05923 | C2H5g14490 | LOC_Os05g46220 | Os05g0539600 | - | Detail |
| CX5g040683 | 5:22,449,147-22,452,005 | - | C1H5g24903 | C2H5g27574 | LOC_Os05g46230 | Os05g0539700 | - | Detail |
| CX5g040385 | 5:22,455,800-22,457,089 | - | C1H5g09340 | C2H5g03274 | LOC_Os05g46240 | Os05g0539800 | - | Detail |
| CX5g040129 | 5:22,461,167-22,463,572 | + | C1H5g27591 | C2H5g20087 | LOC_Os05g46250 | Os05g0539900 | - | Detail |
| CX5g039216 | 5:22,465,384-22,468,716 | + | C1H5g14200 | C2H5g21500 | LOC_Os05g46260 | Os05g0540000 | OsFSE6, OsGINT1 | Detail |
| CX5g041012 | 5:22,492,401-22,498,944 | + | C1H5g01480 | C2H5g25396 | LOC_Os05g46330 | Os05g0540800 | - | Detail |
| CX5g036866 | 5:22,500,892-22,502,013 | - | C1H5g24700 | C2H5g16790 | LOC_Os05g46340 | Os05g0540900 | - | Detail |
| CX5g037419 | 5:22,506,131-22,508,824 | + | C1H5g20535 | C2H5g11235 | LOC_Os05g46350 | Os05g0541100 | - | Detail |
| CX5g036893 | 5:22,521,971-22,523,209 | + | C1H5g12775 | C2H5g14117 | LOC_Os05g46370 | Os05g0541400 | OsLF | Detail |
| CX5g040191 | 5:22,527,879-22,529,447 | + | C1H5g21489 | C2H5g27978 | LOC_Os05g46380 | Os05g0540600 | - | Detail |