| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16030 | 4:20,604,880-20,606,065 | - | C2H4g00702 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C1H4g00073 | 4:20,614,279-20,618,635 | + | C2H4g19420 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C1H4g04352 | 4:20,623,859-20,625,361 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0306800 | - | Detail |
| C1H4g27433 | 4:20,627,409-20,631,175 | + | C2H4g22876 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C1H4g18621 | 4:20,634,438-20,638,146 | + | C2H4g05936 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C1H4g21886 | 4:20,640,550-20,643,687 | + | C2H4g02841 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C1H4g18594 | 4:20,648,275-20,650,781 | - | C2H4g20727 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C1H4g22390 | 4:20,652,338-20,652,839 | - | C2H4g02603 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C1H4g00302 | 4:20,658,721-20,668,640 | - | C2H4g23069 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C1H4g22436 | 4:20,685,532-20,686,945 | - | C2H4g27268 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g30851 | 4:20,689,258-20,690,068 | - | C2H4g08296 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C1H4g08294 | 4:20,693,208-20,698,478 | - | C2H4g06810 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C1H4g25243 | 4:20,700,221-20,708,124 | - | C2H4g06498 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C1H4g24332 | 4:20,711,314-20,716,411 | - | C2H4g26901 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| C1H4g03925 | 4:20,722,945-20,728,104 | - | C2H4g06549 | - | LOC_Os04g39900 | Os04g0474900 | OsTAGG1, Os4BGlu13 | Detail |
| C1H4g27571 | 4:20,730,737-20,733,148 | + | C2H4g15875 | CX4g031592 | LOC_Os04g39910 | Os04g0475100 | SDRLK-61 | Detail |
| C1H4g19181 | 4:20,737,041-20,739,449 | + | C2H4g18216 | CX4g034833 | LOC_Os04g39930 | Os04g0475200 | SDRLK-62 | Detail |
| C1H4g08744 | 4:20,740,948-20,743,475 | + | C2H4g26452 | CX4g033183 | LOC_Os04g39940 | Os04g0475250 | - | Detail |
| C1H4g16959 | 4:20,746,009-20,746,536 | - | C2H4g17863 | CX4g035822 | LOC_Os04g39950 | Os04g0475300 | - | Detail |
| C1H4g29172 | 4:20,749,146-20,750,381 | - | C2H4g05329 | CX4g033449 | LOC_Os04g39970 | Os04g0475500 | OsV4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040105 | 5:22,199,321-22,201,240 | - | C1H5g28841 | C2H5g28882 | LOC_Os05g45760 | Os05g0534000 | - | Detail |
| CX5g036728 | 5:22,202,227-22,204,462 | + | C1H5g15352 | C2H5g06715 | LOC_Os05g45770 | Os05g0534100 | - | Detail |
| CX5g040134 | 5:22,213,510-22,214,440 | + | C1H5g11246 | - | - | - | - | Detail |
| CX5g040749 | 5:22,216,147-22,217,599 | + | C1H5g21827 | C2H5g12404 | LOC_Os05g45810 | Os05g0534400 | OsCBL4 | Detail |
| CX5g037499 | 5:22,218,867-22,221,355 | - | C1H5g13213 | C2H5g20385 | LOC_Os05g45820 | Os05g0534500 | - | Detail |
| CX5g039192 | 5:22,225,673-22,230,074 | - | C1H5g03368 | C2H5g26781 | LOC_Os05g45830 | Os05g0534600 | - | Detail |
| CX5g040022 | 5:22,232,713-22,237,388 | + | C1H5g18942 | C2H5g01370 | LOC_Os05g45840 | Os05g0534800 | - | Detail |
| CX5g037833 | 5:22,238,777-22,241,431 | + | C1H5g12782 | C2H5g21069 | LOC_Os05g45850 | Os05g0534900 | - | Detail |
| CX5g037747 | 5:22,245,482-22,248,081 | - | C1H5g14563 | C2H5g29794 | LOC_Os05g45860 | Os05g0535100 | - | Detail |
| CX5g040472 | 5:22,251,646-22,251,912 | - | - | C2H5g22490 | - | - | - | Detail |
| CX5g038811 | 5:22,252,193-22,254,331 | + | C1H5g29728 | C2H5g10427 | LOC_Os05g45870 | Os05g0535200 | - | Detail |
| CX5g037476 | 5:22,271,460-22,274,932 | + | C1H5g31590 | C2H5g19368 | LOC_Os05g45880 | Os05g0535400 | - | Detail |
| CX5g038172 | 5:22,276,758-22,280,871 | + | C1H5g15501 | C2H5g22595 | LOC_Os05g45890 | Os05g0535500 | AET1 | Detail |
| CX5g036985 | 5:22,281,292-22,286,103 | - | C1H5g07739 | C2H5g08199 | LOC_Os05g45900 | Os05g0535600 | - | Detail |
| CX5g040827 | 5:22,289,557-22,291,449 | - | C1H5g09902 | C2H5g03964 | LOC_Os05g45910 | Os05g0535700 | - | Detail |
| CX5g039841 | 5:22,292,956-22,297,191 | + | C1H5g26794 | C2H5g23148 | LOC_Os05g45920 | Os05g0535800 | - | Detail |
| CX5g040307 | 5:22,302,617-22,305,216 | + | C1H5g04706 | C2H5g09271 | LOC_Os05g45930 | Os05g0535900 | - | Detail |
| CX5g041010 | 5:22,307,482-22,310,591 | + | C1H5g13586 | C2H5g00994 | LOC_Os05g45950 | Os05g0536200 | OsVDAC2 | Detail |
| CX5g040905 | 5:22,311,259-22,313,113 | - | C1H5g21249 | C2H5g24554 | LOC_Os05g45954 | Os05g0536250 | OsWRI3 | Detail |
| CX5g039751 | 5:22,316,915-22,323,062 | - | C1H5g05098 | C2H5g22798 | - | Os05g0536400 | - | Detail |