| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06127 | 3:32,303,571-32,307,779 | + | C1H3g24850 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C2H3g01988 | 3:32,308,000-32,310,432 | - | C1H3g01007 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C2H3g11755 | 3:32,310,721-32,312,657 | + | C1H3g21046 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C2H3g01237 | 3:32,312,684-32,318,650 | - | C1H3g08743 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C2H3g27702 | 3:32,319,596-32,327,026 | + | C1H3g28947 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C2H3g20877 | 3:32,328,441-32,332,474 | + | C1H3g22971 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C2H3g21220 | 3:32,333,202-32,335,124 | + | C1H3g08128 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C2H3g22425 | 3:32,335,748-32,339,201 | - | C1H3g30449 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C2H3g21394 | 3:32,339,558-32,341,447 | + | C1H3g17557 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C2H3g22805 | 3:32,345,973-32,351,479 | - | C1H3g24479 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C2H3g19054 | 3:32,353,748-32,357,223 | + | C1H3g13171 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C2H3g29284 | 3:32,358,635-32,363,299 | + | C1H3g03440 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C2H3g07021 | 3:32,363,365-32,366,530 | - | C1H3g17919 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| C2H3g14850 | 3:32,370,593-32,376,702 | + | C1H3g09189 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C2H3g09934 | 3:32,380,276-32,383,178 | - | C1H3g04796 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C2H3g04637 | 3:32,383,797-32,385,237 | - | C1H3g08823 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C2H3g26108 | 3:32,386,554-32,389,563 | - | C1H3g29234 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C2H3g24255 | 3:32,390,402-32,390,950 | + | C1H3g31847 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C2H3g26469 | 3:32,391,795-32,400,675 | - | C1H3g01054 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C2H3g09183 | 3:32,401,489-32,403,759 | - | C1H3g13526 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038119 | 5:22,102,754-22,103,689 | + | C1H5g03559 | C2H5g07402 | LOC_Os05g45460 | Os05g0531200 | - | Detail |
| CX5g036978 | 5:22,104,319-22,105,290 | + | C1H5g27001 | - | - | - | - | Detail |
| CX5g037192 | 5:22,110,104-22,110,998 | + | C1H5g22321 | C2H5g17651 | LOC_Os05g45480 | Os05g0531400 | - | Detail |
| CX5g038581 | 5:22,114,524-22,118,540 | + | C1H5g15758 | C2H5g11219 | LOC_Os05g45490 | Os05g0531500 | - | Detail |
| CX5g037981 | 5:22,119,233-22,120,057 | - | C1H5g28033 | C2H5g15734 | LOC_Os05g45500 | Os05g0531600 | - | Detail |
| CX5g038393 | 5:22,120,973-22,121,812 | + | C1H5g08016 | C2H5g12427 | - | Os05g0531700 | - | Detail |
| CX5g038750 | 5:22,128,404-22,131,867 | - | C1H5g04935 | C2H5g24044 | LOC_Os05g45520 | Os05g0531800 | - | Detail |
| CX5g039224 | 5:22,143,927-22,146,519 | - | C1H5g04935 | C2H5g02345 | LOC_Os05g45570 | Os05g0532300 | - | Detail |
| CX5g040316 | 5:22,149,675-22,151,906 | - | C1H5g05498 | C2H5g12338 | LOC_Os05g45580 | Os05g0532500 | - | Detail |
| CX5g038442 | 5:22,153,475-22,157,275 | - | C1H5g05803 | C2H5g06712 | LOC_Os05g45590 | Os05g0532600 | OsHXK2 | Detail |
| CX5g039722 | 5:22,158,567-22,158,824 | - | C1H5g22210 | C2H5g30367 | LOC_Os05g45610 | Os05g0532800 | - | Detail |
| CX5g037022 | 5:22,159,751-22,160,226 | + | C1H5g25723 | C2H5g14529 | - | - | - | Detail |
| CX5g038984 | 5:22,161,379-22,163,997 | + | C1H5g21932 | C2H5g24963 | LOC_Os05g45660 | Os05g0533100 | - | Detail |
| CX5g040305 | 5:22,164,573-22,166,030 | - | C1H5g22241 | C2H5g26779 | LOC_Os05g45670 | Os05g0533200 | - | Detail |
| CX5g037078 | 5:22,168,242-22,174,590 | - | C1H5g26762 | C2H5g19069 | LOC_Os05g45690 | Os05g0533400 | - | Detail |
| CX5g038315 | 5:22,177,641-22,178,672 | - | C1H5g17231 | C2H5g28299 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| CX5g039556 | 5:22,181,510-22,188,191 | + | C1H5g17232 | C2H5g13260 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| CX5g039089 | 5:22,189,311-22,191,369 | + | C1H5g27858 | C2H5g03217 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| CX5g038471 | 5:22,192,442-22,193,964 | + | C1H5g22620 | C2H5g09746 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| CX5g038527 | 5:22,195,248-22,198,855 | + | C1H5g12717 | C2H5g27500 | LOC_Os05g45750 | Os05g0533900 | - | Detail |