| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g25557 | 11:15,749,241-15,749,648 | - | C2H11g22910 | CX11g014792 | LOC_Os11g30370 | Os11g0496600 | - | Detail |
| C1H11g09915 | 11:15,773,627-15,774,320 | + | C2H11g12093 | CX11g012613 | - | - | - | Detail |
| C1H11g16319 | 11:15,780,583-15,787,055 | + | C2H11g14273 | CX11g014085 | LOC_Os11g30410 | Os11g0497000 | OsSAE1a | Detail |
| C1H11g25643 | 11:15,812,926-15,815,269 | + | C2H11g22898 | CX11g012527 | LOC_Os11g30484 | Os11g0498400 | - | Detail |
| C1H11g27815 | 11:15,820,827-15,821,713 | + | C2H11g13934 | CX11g012799 | LOC_Os11g30500 | Os11g0498600 | - | Detail |
| C1H11g08228 | 11:15,855,816-15,864,029 | + | C2H11g29258 | CX11g013443 | LOC_Os11g30560 | Os11g0499600 | - | Detail |
| C1H11g25372 | 11:15,892,494-15,893,002 | + | C2H11g26398 | CX11g012607 | LOC_Os11g30760 | Os11g0502700 | - | Detail |
| C1H11g05886 | 11:15,913,226-15,920,331 | + | C2H11g26777 | CX11g013520 | LOC_Os11g30790 | Os11g0503400 | - | Detail |
| C1H11g21889 | 11:15,923,190-15,923,681 | + | C2H11g16582 | CX11g010910 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g08735 | 11:15,924,188-15,924,835 | + | C2H11g16582 | CX11g010910 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g27107 | 11:15,927,933-15,928,478 | + | C2H11g13181 | CX11g010910 | LOC_Os11g30830 | Os11g0504900 | - | Detail |
| C1H11g18860 | 11:15,931,659-15,937,116 | + | C2H11g04701 | CX11g012967 | - | - | - | Detail |
| C1H11g30898 | 11:15,942,075-15,945,173 | + | C2H11g04191 | - | - | - | - | Detail |
| C1H11g04694 | 11:15,954,724-15,954,989 | + | C2H11g00265 | - | - | - | - | Detail |
| C1H11g22326 | 11:15,956,029-15,957,118 | + | C2H11g03682 | CX11g013108 | LOC_Os11g30910 | Os11g0505300 | STV11, OsSOT1 | Detail |
| C1H11g18981 | 11:15,992,245-15,993,382 | - | C2H11g12950 | CX11g012904 | - | - | - | Detail |
| C1H11g04733 | 11:15,995,549-15,996,340 | - | C2H11g07707 | CX11g013034 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| C1H11g01433 | 11:16,020,079-16,022,560 | - | C2H11g24452 | CX11g011882 | - | - | - | Detail |
| C1H11g28049 | 11:16,038,713-16,041,285 | + | C2H11g19133 | CX11g014596 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| C1H11g02002 | 11:16,043,150-16,049,272 | - | C2H11g00051 | CX11g011414 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038119 | 5:22,102,754-22,103,689 | + | C1H5g03559 | C2H5g07402 | LOC_Os05g45460 | Os05g0531200 | - | Detail |
| CX5g036978 | 5:22,104,319-22,105,290 | + | C1H5g27001 | - | - | - | - | Detail |
| CX5g037192 | 5:22,110,104-22,110,998 | + | C1H5g22321 | C2H5g17651 | LOC_Os05g45480 | Os05g0531400 | - | Detail |
| CX5g038581 | 5:22,114,524-22,118,540 | + | C1H5g15758 | C2H5g11219 | LOC_Os05g45490 | Os05g0531500 | - | Detail |
| CX5g037981 | 5:22,119,233-22,120,057 | - | C1H5g28033 | C2H5g15734 | LOC_Os05g45500 | Os05g0531600 | - | Detail |
| CX5g038393 | 5:22,120,973-22,121,812 | + | C1H5g08016 | C2H5g12427 | - | Os05g0531700 | - | Detail |
| CX5g038750 | 5:22,128,404-22,131,867 | - | C1H5g04935 | C2H5g24044 | LOC_Os05g45520 | Os05g0531800 | - | Detail |
| CX5g039224 | 5:22,143,927-22,146,519 | - | C1H5g04935 | C2H5g02345 | LOC_Os05g45570 | Os05g0532300 | - | Detail |
| CX5g040316 | 5:22,149,675-22,151,906 | - | C1H5g05498 | C2H5g12338 | LOC_Os05g45580 | Os05g0532500 | - | Detail |
| CX5g038442 | 5:22,153,475-22,157,275 | - | C1H5g05803 | C2H5g06712 | LOC_Os05g45590 | Os05g0532600 | OsHXK2 | Detail |
| CX5g039722 | 5:22,158,567-22,158,824 | - | C1H5g22210 | C2H5g30367 | LOC_Os05g45610 | Os05g0532800 | - | Detail |
| CX5g037022 | 5:22,159,751-22,160,226 | + | C1H5g25723 | C2H5g14529 | - | - | - | Detail |
| CX5g038984 | 5:22,161,379-22,163,997 | + | C1H5g21932 | C2H5g24963 | LOC_Os05g45660 | Os05g0533100 | - | Detail |
| CX5g040305 | 5:22,164,573-22,166,030 | - | C1H5g22241 | C2H5g26779 | LOC_Os05g45670 | Os05g0533200 | - | Detail |
| CX5g037078 | 5:22,168,242-22,174,590 | - | C1H5g26762 | C2H5g19069 | LOC_Os05g45690 | Os05g0533400 | - | Detail |
| CX5g038315 | 5:22,177,641-22,178,672 | - | C1H5g17231 | C2H5g28299 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| CX5g039556 | 5:22,181,510-22,188,191 | + | C1H5g17232 | C2H5g13260 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| CX5g039089 | 5:22,189,311-22,191,369 | + | C1H5g27858 | C2H5g03217 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| CX5g038471 | 5:22,192,442-22,193,964 | + | C1H5g22620 | C2H5g09746 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| CX5g038527 | 5:22,195,248-22,198,855 | + | C1H5g12717 | C2H5g27500 | LOC_Os05g45750 | Os05g0533900 | - | Detail |