| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g05375 | 4:26,429,040-26,429,576 | + | - | CX4g034398 | LOC_Os04g51890 | Os04g0608300 | - | Detail |
| C2H4g29904 | 4:26,439,413-26,445,439 | + | C1H4g12772 | CX4g035281 | LOC_Os04g51900 | Os04g0608400 | - | Detail |
| C2H4g09751 | 4:26,445,897-26,451,851 | - | C1H4g08259 | CX4g034715 | LOC_Os04g51910 | Os04g0608500 | OsRpn2b | Detail |
| C2H4g13061 | 4:26,453,644-26,455,664 | - | C1H4g09401 | CX4g034786 | LOC_Os04g51920 | Os04g0608600 | - | Detail |
| C2H4g04998 | 4:26,462,752-26,467,173 | + | C1H4g08184 | CX4g035213 | LOC_Os04g51940 | Os04g0608800 | - | Detail |
| C2H4g22085 | 4:26,467,276-26,471,406 | - | C1H4g21318 | CX4g033381 | LOC_Os04g51950 | Os04g0608900 | OsDPK4 | Detail |
| C2H4g09513 | 4:26,473,024-26,476,193 | + | C1H4g09678 | CX4g033039 | LOC_Os04g51960 | Os04g0609100 | - | Detail |
| C2H4g22846 | 4:26,482,999-26,486,746 | - | C1H4g11239 | CX4g036027 | LOC_Os04g51970 | Os04g0609200 | - | Detail |
| C2H4g10194 | 4:26,490,363-26,492,231 | + | C1H4g04504 | CX4g036172 | LOC_Os04g51980 | Os04g0609300 | - | Detail |
| C2H4g14068 | 4:26,498,621-26,500,670 | + | C1H4g23593 | CX4g032055 | LOC_Os04g51990 | Os04g0609500 | - | Detail |
| C2H4g14049 | 4:26,504,385-26,507,883 | - | C1H4g02872 | CX4g033415 | LOC_Os04g52000 | Os04g0609600 | - | Detail |
| C2H4g12333 | 4:26,514,664-26,530,102 | - | C1H4g17909 | CX4g035873 | LOC_Os04g52020 | Os04g0609700 | - | Detail |
| C2H4g29505 | 4:26,530,936-26,536,074 | - | C1H4g16882 | CX4g033944 | LOC_Os04g52040 | Os04g0609900 | - | Detail |
| C2H4g09466 | 4:26,536,495-26,541,268 | - | C1H4g30135 | CX4g033944 | LOC_Os04g52050 | Os04g0610000 | - | Detail |
| C2H4g24559 | 4:26,542,707-26,547,695 | - | C1H4g03039 | CX4g036281 | LOC_Os04g52060 | Os04g0610100 | - | Detail |
| C2H4g13843 | 4:26,549,342-26,555,794 | + | C1H4g26012 | CX4g036281 | LOC_Os04g52074 | Os04g0610200 | - | Detail |
| C2H4g28477 | 4:26,560,909-26,561,577 | + | C1H4g06177 | CX4g032544 | LOC_Os04g52090 | Os04g0610400 | ERF77, OsAP2-39, OsERF#077, OsERF077, OsERF77, AP2/EREBP#149, AP2/EREBP149 | Detail |
| C2H4g06680 | 4:26,566,963-26,570,362 | - | C1H4g22248 | CX4g031762 | LOC_Os04g52100 | Os04g0610500 | - | Detail |
| C2H4g15134 | 4:26,572,339-26,573,300 | + | C1H4g09586 | CX4g031847 | LOC_Os04g52110 | Os04g0610600 | - | Detail |
| C2H4g09334 | 4:26,573,865-26,578,492 | - | C1H4g14376 | CX4g033504 | LOC_Os04g52120 | Os04g0610700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040089 | 5:21,997,430-22,000,048 | - | C1H5g08207 | C2H5g20737 | LOC_Os05g45240 | Os05g0528600 | YUCCA2, OsYUCCA2, OsYUC2 | Detail |
| CX5g037129 | 5:22,012,325-22,014,795 | + | C1H5g01627 | C2H5g24380 | LOC_Os05g45270 | Os05g0528900 | - | Detail |
| CX5g037006 | 5:22,015,601-22,018,667 | - | C1H5g10151 | C2H5g24809 | LOC_Os05g45280 | Os05g0529000 | OsCOLE1 | Detail |
| CX5g037310 | 5:22,021,876-22,022,604 | - | C1H5g28513 | C2H5g17684 | LOC_Os05g45300 | Os05g0529200 | - | Detail |
| CX5g038523 | 5:22,023,854-22,026,173 | - | C1H5g24048 | C2H5g19780 | LOC_Os05g45310 | Os05g0529300 | - | Detail |
| CX5g039119 | 5:22,026,831-22,028,762 | + | C1H5g11025 | C2H5g25402 | LOC_Os05g45320 | Os05g0529400 | - | Detail |
| CX5g036791 | 5:22,037,314-22,042,436 | + | C1H5g31384 | C2H5g16121 | LOC_Os05g45340 | Os05g0529600 | - | Detail |
| CX5g038291 | 5:22,049,284-22,051,756 | - | C1H5g03075 | C2H5g16704 | LOC_Os05g45350 | Os05g0529700 | - | Detail |
| CX5g039702 | 5:22,054,994-22,058,152 | - | C1H5g03402 | C2H5g05411 | LOC_Os05g45370 | Os05g0529900 | - | Detail |
| CX5g038212 | 5:22,063,733-22,066,681 | - | C1H5g16768 | C2H5g30642 | LOC_Os05g45400 | Os05g0530300 | - | Detail |
| CX5g039260 | 5:22,073,276-22,074,890 | + | C1H5g10593 | C2H5g07629 | LOC_Os05g45410 | Os05g0530400 | OsSPL7, SPL7, HSFA-4d | Detail |
| CX5g040944 | 5:22,075,777-22,079,146 | - | C1H5g11637 | C2H5g03685 | LOC_Os05g45420 | Os05g0530500 | - | Detail |
| CX5g038767 | 5:22,081,329-22,081,826 | + | - | C2H5g04972 | - | - | - | Detail |
| CX5g039621 | 5:22,082,087-22,082,386 | + | - | - | - | - | - | Detail |
| CX5g039408 | 5:22,086,192-22,087,616 | - | C1H5g15948 | C2H5g21081 | LOC_Os05g45430 | Os05g0530701 | - | Detail |
| CX5g038532 | 5:22,087,946-22,088,119 | + | - | - | - | Os02g0188201 | - | Detail |
| CX5g037145 | 5:22,093,152-22,093,454 | - | C1H5g05296 | C2H5g17893 | - | Os07g0631500 | - | Detail |
| CX5g038339 | 5:22,093,564-22,094,535 | + | - | - | - | - | - | Detail |
| CX5g036906 | 5:22,097,800-22,098,228 | + | C1H5g24612 | C2H5g28427 | LOC_Os05g45440 | Os05g0531000 | OsS40-14 | Detail |
| CX5g038460 | 5:22,099,616-22,100,059 | + | C1H5g13864 | C2H5g25354 | LOC_Os05g45450 | Os05g0531100 | OsS40-1 | Detail |