| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g20399 | 10:11,809,744-11,813,020 | - | C2H10g22164 | CX10g009328 | LOC_Os10g25010 | Os10g0389000 | - | Detail |
| C1H10g16753 | 10:11,819,040-11,820,775 | - | C2H10g08118 | CX10g008287 | LOC_Os10g25030 | Os10g0389200 | OsRCCR1, RCCR1 | Detail |
| C1H10g31217 | 10:11,828,995-11,830,640 | - | C2H10g08118 | CX10g008287 | LOC_Os10g25030 | Os10g0389200 | OsRCCR1, RCCR1 | Detail |
| C1H10g29678 | 10:11,833,918-11,835,802 | - | C2H10g06911 | CX10g009111 | LOC_Os10g25040 | Os10g0389300 | OsRCCR2, RCCR2 | Detail |
| C1H10g05335 | 10:11,839,201-11,841,058 | - | C2H10g10371 | CX10g010034 | LOC_Os10g25060 | Os10g0389500 | - | Detail |
| C1H10g25222 | 10:11,850,419-11,855,860 | - | C2H10g02601 | CX10g010434 | LOC_Os10g25090 | Os10g0389800 | - | Detail |
| C1H10g17161 | 10:11,865,844-11,866,522 | - | C2H10g04454 | CX10g010038 | LOC_Os10g25100 | Os10g0390000 | - | Detail |
| C1H10g21265 | 10:11,868,410-11,874,478 | - | C2H10g08896 | CX10g010064 | LOC_Os10g25110 | Os10g0390100 | - | Detail |
| C1H10g19918 | 10:11,885,642-11,892,011 | + | C2H10g25470 | CX10g010526 | LOC_Os10g25130 | Os10g0390500 | ALAAT, alaAT, ALT-1, OsAlaAT1, AlaAT1 | Detail |
| C1H10g03129 | 10:11,895,336-11,899,654 | + | C2H10g20842 | CX10g007360 | LOC_Os10g25140 | Os10g0390600 | - | Detail |
| C1H10g18016 | 10:11,900,286-11,901,225 | + | C2H10g18753 | CX10g008314 | LOC_Os10g25150 | Os10g0390701 | - | Detail |
| C1H10g31052 | 10:11,907,618-11,908,698 | + | C2H10g26134 | CX10g009554 | LOC_Os10g25170 | Os10g0390800 | - | Detail |
| C1H10g00464 | 10:11,911,463-11,913,050 | - | - | - | - | Os10g0390900 | - | Detail |
| C1H10g11552 | 10:11,919,355-11,921,054 | - | C2H10g15320 | CX10g008890 | LOC_Os10g25180 | Os10g0390900 | - | Detail |
| C1H10g07468 | 10:11,927,587-11,936,989 | + | C2H10g13856 | CX10g010213 | LOC_Os10g25200 | Os10g0391100 | - | Detail |
| C1H10g24597 | 10:11,941,715-11,946,031 | - | C2H10g25871 | CX10g007514 | LOC_Os10g25220 | Os10g0391300 | - | Detail |
| C1H10g21122 | 10:11,971,344-11,972,105 | - | C2H10g22720 | - | LOC_Os10g25250 | Os10g0391801 | OsJAZ14, OsTIFY11f | Detail |
| C1H10g09496 | 10:11,981,881-11,982,420 | - | C2H10g11060 | - | - | - | - | Detail |
| C1H10g16124 | 10:11,982,432-11,982,676 | - | C2H10g15505 | - | - | - | - | Detail |
| C1H10g14746 | 10:11,995,760-11,996,510 | - | C2H10g12759 | - | LOC_Os10g25290 | Os10g0392400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040089 | 5:21,997,430-22,000,048 | - | C1H5g08207 | C2H5g20737 | LOC_Os05g45240 | Os05g0528600 | YUCCA2, OsYUCCA2, OsYUC2 | Detail |
| CX5g037129 | 5:22,012,325-22,014,795 | + | C1H5g01627 | C2H5g24380 | LOC_Os05g45270 | Os05g0528900 | - | Detail |
| CX5g037006 | 5:22,015,601-22,018,667 | - | C1H5g10151 | C2H5g24809 | LOC_Os05g45280 | Os05g0529000 | OsCOLE1 | Detail |
| CX5g037310 | 5:22,021,876-22,022,604 | - | C1H5g28513 | C2H5g17684 | LOC_Os05g45300 | Os05g0529200 | - | Detail |
| CX5g038523 | 5:22,023,854-22,026,173 | - | C1H5g24048 | C2H5g19780 | LOC_Os05g45310 | Os05g0529300 | - | Detail |
| CX5g039119 | 5:22,026,831-22,028,762 | + | C1H5g11025 | C2H5g25402 | LOC_Os05g45320 | Os05g0529400 | - | Detail |
| CX5g036791 | 5:22,037,314-22,042,436 | + | C1H5g31384 | C2H5g16121 | LOC_Os05g45340 | Os05g0529600 | - | Detail |
| CX5g038291 | 5:22,049,284-22,051,756 | - | C1H5g03075 | C2H5g16704 | LOC_Os05g45350 | Os05g0529700 | - | Detail |
| CX5g039702 | 5:22,054,994-22,058,152 | - | C1H5g03402 | C2H5g05411 | LOC_Os05g45370 | Os05g0529900 | - | Detail |
| CX5g038212 | 5:22,063,733-22,066,681 | - | C1H5g16768 | C2H5g30642 | LOC_Os05g45400 | Os05g0530300 | - | Detail |
| CX5g039260 | 5:22,073,276-22,074,890 | + | C1H5g10593 | C2H5g07629 | LOC_Os05g45410 | Os05g0530400 | OsSPL7, SPL7, HSFA-4d | Detail |
| CX5g040944 | 5:22,075,777-22,079,146 | - | C1H5g11637 | C2H5g03685 | LOC_Os05g45420 | Os05g0530500 | - | Detail |
| CX5g038767 | 5:22,081,329-22,081,826 | + | - | C2H5g04972 | - | - | - | Detail |
| CX5g039621 | 5:22,082,087-22,082,386 | + | - | - | - | - | - | Detail |
| CX5g039408 | 5:22,086,192-22,087,616 | - | C1H5g15948 | C2H5g21081 | LOC_Os05g45430 | Os05g0530701 | - | Detail |
| CX5g038532 | 5:22,087,946-22,088,119 | + | - | - | - | Os02g0188201 | - | Detail |
| CX5g037145 | 5:22,093,152-22,093,454 | - | C1H5g05296 | C2H5g17893 | - | Os07g0631500 | - | Detail |
| CX5g038339 | 5:22,093,564-22,094,535 | + | - | - | - | - | - | Detail |
| CX5g036906 | 5:22,097,800-22,098,228 | + | C1H5g24612 | C2H5g28427 | LOC_Os05g45440 | Os05g0531000 | OsS40-14 | Detail |
| CX5g038460 | 5:22,099,616-22,100,059 | + | C1H5g13864 | C2H5g25354 | LOC_Os05g45450 | Os05g0531100 | OsS40-1 | Detail |