| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20574 | 3:9,329,178-9,330,089 | - | C2H3g09178 | CX3g025577 | LOC_Os03g18770 | Os03g0299600 | - | Detail |
| C1H3g08338 | 3:9,337,998-9,342,845 | - | C2H3g30408 | CX3g025927 | LOC_Os03g18790 | Os03g0299800 | - | Detail |
| C1H3g29390 | 3:9,349,800-9,353,092 | + | C2H3g01680 | CX3g025303 | LOC_Os03g18810 | Os03g0299900 | - | Detail |
| C1H3g08396 | 3:9,354,500-9,355,846 | - | C2H3g29698 | CX3g025517 | LOC_Os03g18820 | Os03g0300000 | - | Detail |
| C1H3g18508 | 3:9,358,745-9,363,101 | - | C2H3g28163 | CX3g030992 | LOC_Os03g18830 | Os03g0300200 | - | Detail |
| C1H3g23407 | 3:9,363,130-9,368,923 | + | C2H3g21841 | CX3g030790 | LOC_Os03g18840 | Os03g0300300 | - | Detail |
| C1H3g17735 | 3:9,369,635-9,370,688 | + | C2H3g29151 | CX3g027983 | LOC_Os03g18850 | Os03g0300400 | JIOsPR10 | Detail |
| C1H3g06825 | 3:9,372,739-9,374,436 | - | C2H3g16892 | CX3g030884 | LOC_Os03g18860 | Os03g0300500 | - | Detail |
| C1H3g14250 | 3:9,378,512-9,379,460 | - | C2H3g14772 | CX3g030255 | LOC_Os03g18870 | Os03g0300600 | - | Detail |
| C1H3g00200 | 3:9,382,697-9,383,802 | - | C2H3g30255 | CX3g030501 | LOC_Os03g18880 | Os03g0300700 | - | Detail |
| C1H3g08826 | 3:9,389,647-9,390,753 | + | C2H3g17031 | CX3g028981 | LOC_Os03g18890 | Os03g0300900 | - | Detail |
| C1H3g12713 | 3:9,403,361-9,405,376 | + | C2H3g21070 | CX3g030388 | LOC_Os03g18910 | Os03g0301200 | - | Detail |
| C1H3g28323 | 3:9,411,285-9,417,311 | + | C2H3g13460 | CX3g027587 | LOC_Os03g18940 | Os03g0301400 | - | Detail |
| C1H3g10793 | 3:9,419,559-9,421,572 | + | C2H3g01957 | CX3g029287 | LOC_Os03g18950 | Os03g0301500 | - | Detail |
| C1H3g07825 | 3:9,423,765-9,426,852 | + | C2H3g01576 | CX3g028454 | LOC_Os03g18960 | Os03g0301600 | - | Detail |
| C1H3g28727 | 3:9,427,701-9,431,383 | - | C2H3g21248 | CX3g025125 | LOC_Os03g18970 | Os03g0301700 | - | Detail |
| C1H3g15707 | 3:9,436,895-9,442,990 | - | C2H3g22040 | CX3g025499 | LOC_Os03g18980 | Os03g0301800 | - | Detail |
| C1H3g00497 | 3:9,452,767-9,453,381 | + | C2H3g24219 | CX3g025566 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| C1H3g25455 | 3:9,456,188-9,456,952 | + | C2H3g19658 | - | LOC_Os03g19000 | Os03g0301950 | PEX11-2, OsPEX11-2, OsPEX11-5 | Detail |
| C1H3g00671 | 3:9,458,395-9,460,800 | + | C2H3g01269 | - | LOC_Os03g19010 | Os03g0302000 | PEX11-3, OsPEX11-3, OsPEX11 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038651 | 5:21,830,463-21,831,182 | - | - | C2H5g20123 | LOC_Os05g44792 | Os05g0522700 | - | Detail |
| CX5g039792 | 5:21,831,403-21,831,825 | + | - | - | LOC_Os05g44800 | Os05g0523200 | - | Detail |
| CX5g039399 | 5:21,834,531-21,836,924 | - | C1H5g11095 | C2H5g25706 | LOC_Os05g44810 | Os05g0523300 | OsIAA18 | Detail |
| CX5g039583 | 5:21,848,730-21,849,346 | + | C1H5g00095 | - | LOC_Os05g44900 | Os05g0524100 | - | Detail |
| CX5g039562 | 5:21,850,080-21,852,957 | - | C1H5g00746 | C2H5g29517 | LOC_Os05g44910 | Os05g0524200 | - | Detail |
| CX5g037820 | 5:21,854,015-21,854,219 | - | - | - | - | - | - | Detail |
| CX5g038177 | 5:21,855,086-21,858,675 | + | C1H5g24165 | C2H5g22943 | LOC_Os05g44916 | Os05g0524300 | - | Detail |
| CX5g039367 | 5:21,860,124-21,864,557 | + | C1H5g22941 | C2H5g10764 | LOC_Os05g44922 | Os05g0524400 | - | Detail |
| CX5g038372 | 5:21,917,370-21,918,137 | - | C1H5g07604 | C2H5g01621 | LOC_Os05g45020 | Os05g0525900 | OsTZF7 | Detail |
| CX5g039462 | 5:21,918,598-21,918,747 | - | - | - | - | Os02g0630650 | - | Detail |
| CX5g036751 | 5:21,921,806-21,922,915 | + | C1H5g15368 | C2H5g22363 | LOC_Os05g45030 | Os05g0526200 | - | Detail |
| CX5g037780 | 5:21,923,776-21,925,945 | + | C1H5g20668 | C2H5g03491 | LOC_Os05g45040 | Os05g0526300 | - | Detail |
| CX5g040740 | 5:21,926,667-21,928,689 | - | C1H5g25174 | C2H5g05444 | LOC_Os05g45050 | Os05g0526400 | - | Detail |
| CX5g038766 | 5:21,932,964-21,933,587 | + | C1H5g10756 | C2H5g24922 | LOC_Os05g45060 | Os05g0526600 | - | Detail |
| CX5g038511 | 5:21,936,169-21,936,936 | - | C1H5g13393 | C2H5g25281 | LOC_Os05g45070 | Os05g0526700 | - | Detail |
| CX5g040432 | 5:21,941,098-21,942,540 | + | C1H5g25146 | C2H5g08108 | LOC_Os05g45080 | Os05g0526800 | - | Detail |
| CX5g040244 | 5:21,944,343-21,945,776 | + | C1H5g26327 | C2H5g26808 | LOC_Os05g45090 | Os05g0526900 | - | Detail |
| CX5g038665 | 5:21,974,105-21,981,822 | - | C1H5g24507 | C2H5g01814 | LOC_Os05g45210 | Os05g0528000 | OsRBOH5 | Detail |
| CX5g037204 | 5:21,985,649-21,986,286 | - | C1H5g28587 | C2H5g28345 | LOC_Os05g45220 | Os05g0528200 | - | Detail |
| CX5g039623 | 5:21,992,855-21,994,053 | - | C1H5g01594 | C2H5g03986 | LOC_Os05g45230 | Os05g0528500 | - | Detail |