| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12726 | 1:34,938,831-34,939,619 | + | C2H1g20697 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C1H1g26541 | 1:34,942,504-34,947,620 | + | C2H1g10610 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C1H1g18538 | 1:34,948,320-34,955,231 | + | C2H1g19705 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C1H1g19874 | 1:34,956,430-34,957,545 | + | C2H1g29254 | CX1g000036 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| C1H1g08768 | 1:34,972,914-34,976,480 | + | C2H1g19503 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C1H1g13810 | 1:34,987,033-34,989,975 | - | C2H1g14371 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C1H1g00934 | 1:34,993,325-34,997,431 | + | C2H1g27794 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C1H1g26380 | 1:34,998,549-34,999,821 | - | C2H1g06918 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C1H1g26157 | 1:35,001,120-35,004,353 | - | C2H1g30537 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C1H1g02663 | 1:35,011,447-35,013,794 | + | C2H1g27819 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C1H1g28238 | 1:35,014,156-35,018,530 | - | C2H1g20684 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C1H1g12819 | 1:35,026,038-35,027,558 | + | C2H1g22636 | CX1g001370 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| C1H1g18966 | 1:35,031,109-35,032,479 | - | - | CX1g007120 | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| C1H1g09218 | 1:35,033,587-35,036,812 | + | C2H1g29519 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| C1H1g22460 | 1:35,039,709-35,040,078 | - | C2H1g05938 | - | - | Os01g0909150 | - | Detail |
| C1H1g21604 | 1:35,041,397-35,051,861 | - | C2H1g23470 | CX1g001307 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| C1H1g09277 | 1:35,055,480-35,055,878 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | - | - | Detail |
| C1H1g24131 | 1:35,056,030-35,059,812 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| C1H1g09913 | 1:35,060,666-35,061,631 | - | - | CX1g002611 | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| C1H1g04879 | 1:35,067,984-35,071,444 | + | C2H1g20920 | CX1g003036 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039614 | 5:21,696,045-21,698,017 | - | C1H5g13206 | C2H5g23024 | LOC_Os05g44390 | Os05g0520200 | - | Detail |
| CX5g041084 | 5:21,704,374-21,705,898 | + | C1H5g27133 | C2H5g29984 | LOC_Os05g44400 | Os05g0520300 | - | Detail |
| CX5g038455 | 5:21,711,192-21,711,846 | + | - | - | - | - | - | Detail |
| CX5g037559 | 5:21,717,133-21,718,117 | + | C1H5g30703 | C2H5g01469 | LOC_Os05g44410 | Os05g0202600 | - | Detail |
| CX5g037070 | 5:21,721,690-21,724,075 | + | C1H9g26618 | C2H9g30468 | LOC_Os09g17930 | - | - | Detail |
| CX5g037160 | 5:21,735,987-21,736,937 | + | C1H5g26951 | C2H5g12159 | LOC_Os05g44420 | Os05g0520600 | - | Detail |
| CX5g040984 | 5:21,755,990-21,758,040 | + | C1H5g28942 | C2H5g27231 | LOC_Os05g44530 | Os05g0398100 | - | Detail |
| CX5g037570 | 5:21,764,703-21,771,772 | - | C1H5g15943 | C2H5g01580 | LOC_Os05g44560 | Os05g0397900 | - | Detail |
| CX5g040762 | 5:21,774,495-21,776,912 | - | C1H5g15028 | C2H5g06721 | LOC_Os05g44570 | Os05g0521300 | - | Detail |
| CX5g040709 | 5:21,781,812-21,784,440 | + | C1H5g27271 | C2H5g11284 | LOC_Os05g44580 | Os05g0521400 | - | Detail |
| CX5g039109 | 5:21,786,727-21,791,976 | + | C1H5g22714 | C2H5g26977 | LOC_Os05g44590 | Os05g0521500 | - | Detail |
| CX5g038255 | 5:21,793,917-21,797,882 | + | C1H5g12005 | C2H5g14641 | LOC_Os05g44600 | Os05g0521600 | - | Detail |
| CX5g041159 | 5:21,800,254-21,800,598 | + | C1H4g15769 | C2H5g07449 | - | - | - | Detail |
| CX5g038786 | 5:21,801,471-21,801,740 | - | - | - | - | - | - | Detail |
| CX5g036749 | 5:21,802,480-21,802,632 | - | - | - | - | - | - | Detail |
| CX5g036755 | 5:21,805,627-21,807,311 | - | C1H5g04739 | C2H5g18579 | LOC_Os05g44630 | Os05g0521900 | - | Detail |
| CX5g037506 | 5:21,816,359-21,820,722 | + | C1H5g28062 | C2H5g21908 | LOC_Os05g44760 | Os05g0522500 | OsHXK5 | Detail |
| CX5g036790 | 5:21,821,299-21,824,623 | - | C1H5g03113 | C2H5g17737 | LOC_Os05g44770 | Os05g0522600 | - | Detail |
| CX5g038475 | 5:21,825,164-21,825,325 | - | - | - | - | Os12g0542601 | - | Detail |
| CX5g037587 | 5:21,827,055-21,827,759 | - | C1H5g12912 | C2H5g20123 | LOC_Os05g44780 | Os05g0522700 | - | Detail |