| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30676 | 3:20,784,935-20,789,025 | + | C1H3g31743 | CX3g027969 | LOC_Os03g40540 | Os03g0602300 | OsBRD1, OsDWARF | Detail |
| C2H3g17661 | 3:20,794,087-20,799,178 | + | C1H3g17649 | CX3g026097 | LOC_Os03g40550 | Os03g0602600 | HSA1, OsFLN2, HSA1/OsFLN2 | Detail |
| C2H3g06081 | 3:20,802,911-20,808,131 | - | C1H3g14588 | CX3g026160 | LOC_Os03g40610 | Os03g0603100 | - | Detail |
| C2H3g09028 | 3:20,872,653-20,876,352 | + | C1H3g26758 | CX3g029684 | LOC_Os03g40670 | Os03g0603600 | - | Detail |
| C2H3g19200 | 3:20,924,799-20,925,579 | + | C1H3g15118 | CX3g029136 | - | Os03g0789600 | - | Detail |
| C2H3g23447 | 3:20,937,852-20,939,276 | + | C1H3g27392 | CX3g025313 | LOC_Os03g40770 | Os03g0604566 | - | Detail |
| C2H3g01476 | 3:20,940,772-20,946,213 | - | C1H3g29572 | CX3g029068 | LOC_Os03g40780 | Os03g0604600 | - | Detail |
| C2H3g29089 | 3:20,994,865-20,996,867 | - | C1H3g15527 | CX3g025804 | LOC_Os03g40930 | Os03g0606100 | - | Detail |
| C2H3g00163 | 3:21,042,269-21,044,985 | - | C1H3g29161 | CX3g025127 | LOC_Os03g41064 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| C2H3g26892 | 3:21,057,321-21,057,773 | - | C1H3g01431 | - | LOC_Os03g41050 | Os03g0607100 | - | Detail |
| C2H3g02928 | 3:21,058,798-21,059,152 | - | C1H3g01550 | CX3g027262 | LOC_Os03g41060 | Os03g0607200 | - | Detail |
| C2H3g23130 | 3:21,068,563-21,070,046 | - | C1H12g22810 | - | - | - | - | Detail |
| C2H3g22608 | 3:21,085,564-21,088,849 | - | C1H3g28561 | CX3g025127 | LOC_Os03g41070 | Os03g0607400 | - | Detail |
| C2H3g05599 | 3:21,090,319-21,095,973 | + | C1H3g18716 | CX3g026140 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| C2H3g06432 | 3:21,097,436-21,097,702 | + | C1H3g08205 | CX3g026140 | - | - | - | Detail |
| C2H3g18057 | 3:21,100,668-21,115,704 | + | C1H3g15026 | CX3g026140 | LOC_Os03g41080 | Os03g0607500 | - | Detail |
| C2H3g23306 | 3:21,116,126-21,117,088 | - | C1H3g16629 | CX3g027100 | - | Os03g0653900 | - | Detail |
| C2H3g00656 | 3:21,209,983-21,210,727 | + | - | - | - | - | - | Detail |
| C2H3g10659 | 3:21,214,357-21,222,145 | - | C1H3g05229 | CX3g025340 | - | Os03g0680100 | - | Detail |
| C2H3g06565 | 3:21,284,912-21,286,026 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040040 | 5:21,545,832-21,548,036 | + | C1H5g21769 | C2H5g27370 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| CX5g037606 | 5:21,548,848-21,549,774 | + | C1H5g08677 | C2H5g00950 | LOC_Os05g44170 | Os05g0517900 | - | Detail |
| CX5g039831 | 5:21,550,134-21,552,045 | - | C1H5g28867 | C2H5g12138 | LOC_Os05g44180 | Os05g0518000 | OsFTL10 | Detail |
| CX5g040142 | 5:21,561,281-21,565,761 | + | C1H5g21350 | C2H5g05606 | LOC_Os05g44190 | Os05g0518200 | - | Detail |
| CX5g037767 | 5:21,567,246-21,569,221 | - | C1H5g09247 | C2H5g18484 | LOC_Os05g44200 | Os05g0518300 | - | Detail |
| CX5g038515 | 5:21,574,951-21,575,103 | + | - | - | - | Os07g0616100 | - | Detail |
| CX5g040555 | 5:21,588,933-21,589,088 | + | - | - | - | - | - | Detail |
| CX5g038489 | 5:21,602,412-21,609,833 | + | C1H5g08772 | C2H5g13659 | LOC_Os05g44210 | Os05g0518600 | OsTPS1 | Detail |
| CX5g040893 | 5:21,619,249-21,619,650 | + | C1H5g24612 | C2H5g28427 | LOC_Os05g44260 | Os05g0518800 | OsS40-2 | Detail |
| CX5g040062 | 5:21,632,448-21,633,260 | + | C1H5g01128 | C2H5g28470 | LOC_Os05g44270 | Os05g0519000 | - | Detail |
| CX5g037508 | 5:21,642,564-21,642,821 | + | - | - | - | - | - | Detail |
| CX5g038803 | 5:21,643,880-21,646,797 | + | C1H5g07867 | C2H5g30115 | LOC_Os05g44290 | Os05g0519200 | - | Detail |
| CX5g038305 | 5:21,648,379-21,650,474 | - | C1H5g30314 | C2H5g03043 | LOC_Os05g44300 | Os05g0519300 | OsDUF50606 | Detail |
| CX5g038313 | 5:21,654,055-21,660,380 | - | C1H5g04824 | C2H5g21922 | LOC_Os05g44310 | Os05g0519400 | - | Detail |
| CX5g039441 | 5:21,661,258-21,665,251 | - | C1H5g25319 | C2H5g04929 | LOC_Os05g44320 | Os05g0519500 | - | Detail |
| CX5g038744 | 5:21,669,884-21,674,254 | + | C1H5g00452 | C2H5g22047 | LOC_Os05g44330 | Os05g0519600 | - | Detail |
| CX5g037782 | 5:21,675,832-21,678,977 | - | C1H5g17989 | C2H5g05695 | LOC_Os05g44340 | Os05g0519700 | - | Detail |
| CX5g040719 | 5:21,679,903-21,683,015 | + | C1H5g30392 | C2H5g00768 | LOC_Os05g44350 | Os05g0519800 | - | Detail |
| CX5g037061 | 5:21,683,813-21,689,325 | - | C1H5g16249 | C2H5g18682 | LOC_Os05g44360 | Os05g0519900 | - | Detail |
| CX5g038893 | 5:21,692,171-21,694,010 | - | C1H5g12015 | C2H5g28805 | LOC_Os05g44380 | Os05g0520100 | - | Detail |