| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g00237 | 2:32,239,112-32,240,134 | - | - | CX2g024930 | LOC_Os02g57790 | Os02g0823900 | - | Detail |
| C2H2g25346 | 2:32,249,307-32,252,603 | - | C1H2g31329 | CX2g022048 | LOC_Os02g57800 | Os02g0824000 | - | Detail |
| C2H2g15803 | 2:32,260,379-32,261,968 | + | C1H2g04626 | CX2g021425 | LOC_Os02g57810 | Os02g0824100 | - | Detail |
| C2H2g15228 | 2:32,266,258-32,270,522 | - | C1H2g23852 | CX2g022643 | LOC_Os02g57820 | Os02g0824300 | OsAHL5 | Detail |
| C2H2g10963 | 2:32,272,820-32,274,666 | - | C1H2g22363 | - | LOC_Os02g57830 | Os02g0824400 | - | Detail |
| C2H2g06569 | 2:32,275,232-32,276,639 | + | C1H2g00173 | CX2g019084 | LOC_Os02g57840 | Os02g0824500 | - | Detail |
| C2H2g20433 | 2:32,277,394-32,278,411 | - | C1H2g03458 | CX2g020693 | LOC_Os02g57850 | Os02g0824600 | - | Detail |
| C2H2g13039 | 2:32,278,955-32,281,474 | + | C1H4g09732 | CX2g018911 | LOC_Os02g57854 | Os02g0824700 | - | Detail |
| C2H2g08051 | 2:32,282,197-32,283,576 | - | C1H2g01066 | CX2g022145 | LOC_Os02g57960 | Os02g0826000 | - | Detail |
| C2H2g07944 | 2:32,283,664-32,286,846 | - | C1H2g01066 | CX2g022145 | LOC_Os02g57870 | Os02g0826050 | - | Detail |
| C2H2g21189 | 2:32,289,063-32,290,787 | - | C1H2g15349 | CX2g022145 | LOC_Os02g57880 | Os02g0825500 | - | Detail |
| C2H2g27349 | 2:32,291,791-32,294,112 | - | C1H2g01066 | CX2g022145 | LOC_Os02g57960 | Os02g0826000 | - | Detail |
| C2H2g23834 | 2:32,307,284-32,313,783 | - | C1H2g08212 | CX2g023875 | LOC_Os02g57980 | Os02g0826100 | - | Detail |
| C2H2g05583 | 2:32,313,939-32,316,195 | + | C1H2g11587 | CX2g021161 | LOC_Os02g57990 | Os02g0826200 | - | Detail |
| C2H2g23286 | 2:32,318,061-32,318,330 | + | - | CX2g018881 | LOC_Os02g58000 | Os02g0826300 | - | Detail |
| C2H2g04363 | 2:32,321,868-32,322,107 | - | C1H2g23760 | - | LOC_Os02g58010 | - | - | Detail |
| C2H2g20953 | 2:32,322,616-32,328,409 | - | C1H2g10732 | CX2g021152 | LOC_Os02g58020 | Os02g0826500 | - | Detail |
| C2H2g01162 | 2:32,328,909-32,332,096 | - | C1H2g05947 | CX2g023875 | LOC_Os02g57965 | Os02g0826566 | - | Detail |
| C2H2g20068 | 2:32,337,010-32,337,403 | + | C1H2g23547 | CX2g022373 | - | - | - | Detail |
| C2H2g14467 | 2:32,338,974-32,348,703 | - | C1H2g00767 | CX2g021686 | LOC_Os02g58030 | Os02g0826600 | OsIRL6 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040726 | 5:21,302,802-21,304,121 | - | C1H5g20040 | C2H5g13083 | LOC_Os05g43670 | Os05g0512400 | - | Detail |
| CX5g037888 | 5:21,311,886-21,313,393 | + | C1H5g08173 | C2H5g03611 | LOC_Os05g43690 | Os05g0512600 | - | Detail |
| CX5g039008 | 5:21,328,343-21,330,447 | + | C1H5g02984 | C2H5g16900 | LOC_Os05g43760 | Os05g0513100 | - | Detail |
| CX5g040071 | 5:21,338,940-21,343,047 | + | C1H5g10552 | C2H5g24258 | LOC_Os05g43770 | Os05g0513200 | - | Detail |
| CX5g039684 | 5:21,346,303-21,349,184 | + | C1H5g13302 | C2H5g09149 | LOC_Os05g43780 | Os05g0513350 | - | Detail |
| CX5g038930 | 5:21,350,805-21,353,721 | + | C1H5g09663 | C2H5g26918 | LOC_Os05g43790 | Os05g0513400 | - | Detail |
| CX5g036821 | 5:21,358,323-21,359,690 | - | C1H5g15162 | C2H5g05557 | LOC_Os05g43800 | Os05g0513600 | - | Detail |
| CX5g036949 | 5:21,360,225-21,362,703 | - | C1H5g20443 | C2H5g13727 | LOC_Os05g43810 | Os05g0513700 | - | Detail |
| CX5g036780 | 5:21,366,503-21,368,269 | + | C1H5g18479 | C2H5g12600 | LOC_Os05g43820 | Os05g0513800 | - | Detail |
| CX5g040516 | 5:21,368,849-21,372,374 | - | C1H5g21593 | C2H5g13306 | LOC_Os05g43830 | Os05g0513900 | - | Detail |
| CX5g039381 | 5:21,376,869-21,378,404 | + | C1H5g29251 | C2H5g05539 | LOC_Os05g43840 | Os05g0514200 | - | Detail |
| CX5g039707 | 5:21,384,699-21,388,930 | + | C1H5g31291 | C2H5g17185 | LOC_Os05g43850 | Os05g0514300 | - | Detail |
| CX5g039655 | 5:21,391,866-21,393,483 | - | C1H5g31864 | C2H5g21883 | LOC_Os05g43860 | Os05g0514400 | - | Detail |
| CX5g039558 | 5:21,396,311-21,398,456 | + | C1H5g13883 | C2H5g27546 | LOC_Os05g43870 | Os05g0514500 | - | Detail |
| CX5g037140 | 5:21,403,569-21,404,723 | - | C1H5g27703 | C2H5g19387 | LOC_Os05g43880 | Os05g0514600 | GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4 | Detail |
| CX5g039348 | 5:21,417,510-21,417,755 | + | C1H5g12361 | C2H5g15452 | LOC_Os05g43895 | Os05g0514800 | - | Detail |
| CX5g037133 | 5:21,420,006-21,420,212 | + | - | - | - | - | - | Detail |
| CX5g037839 | 5:21,427,472-21,428,467 | + | C1H5g18846 | C2H5g22372 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| CX5g037416 | 5:21,435,417-21,436,061 | + | C1H5g18846 | C2H5g22372 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| CX5g037729 | 5:21,445,071-21,450,289 | + | C1H5g31857 | C2H5g05053 | LOC_Os05g43920 | Os05g0515400 | OsARF14, OsARF3la, OsARF3la/OsARF14 | Detail |