| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037150 | 5:21,172,400-21,173,110 | + | C1H5g08854 | C2H5g06315 | LOC_Os05g43460 | Os05g0510100 | - | Detail |
| CX5g036841 | 5:21,174,405-21,178,310 | - | C1H5g22806 | C2H5g30303 | LOC_Os05g43470 | Os05g0510200 | - | Detail |
| CX5g039782 | 5:21,180,685-21,186,030 | + | C1H5g07819 | C2H5g11558 | LOC_Os05g43480 | Os05g0510300 | - | Detail |
| CX5g039818 | 5:21,189,654-21,190,892 | + | C1H5g09587 | C2H5g22480 | LOC_Os05g43490 | Os05g0510400 | - | Detail |
| CX5g039833 | 5:21,197,867-21,198,109 | - | - | C2H5g26605 | - | Os01g0184200 | - | Detail |
| CX5g039867 | 5:21,199,644-21,201,491 | - | C1H5g05512 | C2H5g22816 | LOC_Os05g43510 | Os05g0510600 | - | Detail |
| CX5g039522 | 5:21,205,395-21,205,888 | + | C1H5g15170 | C2H5g29168 | - | - | - | Detail |
| CX5g037054 | 5:21,212,034-21,217,545 | + | C1H5g30650 | C2H5g01065 | LOC_Os05g43610 | Os05g0512000 | - | Detail |
| CX5g038702 | 5:21,219,099-21,221,112 | + | C1H5g28010 | C2H5g14988 | LOC_Os05g43590 | Os05g0511800 | - | Detail |
| CX5g037699 | 5:21,222,893-21,224,805 | - | C1H5g12550 | C2H5g08259 | LOC_Os05g43582 | Os05g0511700 | - | Detail |
| CX5g037939 | 5:21,226,012-21,228,131 | - | C1H5g02902 | C2H5g13482 | LOC_Os05g43576 | Os05g0511500 | - | Detail |
| CX5g039648 | 5:21,233,678-21,240,020 | + | C1H5g23395 | C2H5g00019 | LOC_Os05g43570 | Os05g0511400 | - | Detail |
| CX5g038876 | 5:21,241,304-21,250,609 | + | C1H5g31163 | - | LOC_Os05g43560 | Os05g0511300 | - | Detail |
| CX5g038504 | 5:21,253,120-21,254,421 | - | C1H5g31608 | C2H5g05981 | LOC_Os05g43550 | Os05g0511050 | - | Detail |
| CX5g036939 | 5:21,255,636-21,257,739 | - | C1H5g23826 | C2H5g08192 | LOC_Os05g43540 | Os05g0511000 | - | Detail |
| CX5g037084 | 5:21,264,680-21,264,856 | + | - | - | - | Os02g0188201 | - | Detail |
| CX5g041060 | 5:21,266,252-21,269,592 | + | C1H5g01984 | C2H5g06890 | LOC_Os05g43530 | Os05g0510800 | OsCSLC7 | Detail |
| CX5g039667 | 5:21,272,019-21,275,391 | - | C1H5g13246 | C2H5g29614 | LOC_Os05g43520 | Os05g0510700 | - | Detail |
| CX5g040965 | 5:21,290,180-21,290,698 | + | C1H5g03553 | C2H5g06953 | LOC_Os05g43640 | Os05g0512100 | - | Detail |
| CX5g040742 | 5:21,293,404-21,296,189 | + | C1H5g21736 | C2H5g26211 | LOC_Os05g43650 | Os05g0512200 | - | Detail |