| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23154 | 4:25,375,879-25,376,383 | + | C2H4g16720 | CX4g035222 | LOC_Os04g48870 | Os04g0578300 | - | Detail |
| C1H4g05799 | 4:25,380,434-25,382,490 | + | C2H4g19270 | CX4g033101 | LOC_Os04g48880 | Os04g0578400 | - | Detail |
| C1H4g10126 | 4:25,385,788-25,387,233 | + | C2H4g07940 | CX4g036080 | - | Os04g0578550 | - | Detail |
| C1H4g19909 | 4:25,389,934-25,392,744 | - | C2H4g30133 | CX4g031675 | LOC_Os04g48930 | Os04g0578600 | OsFRO2, OsFRO1 | Detail |
| C1H4g18610 | 4:25,395,649-25,402,145 | + | C2H4g19460 | CX4g031656 | LOC_Os04g48940 | Os04g0578700 | - | Detail |
| C1H4g06167 | 4:25,403,323-25,405,698 | - | C2H4g08137 | CX4g031706 | LOC_Os04g48950 | Os04g0578800 | - | Detail |
| C1H4g02070 | 4:25,453,772-25,456,031 | + | C2H4g23542 | CX4g031363 | LOC_Os04g49060 | Os04g0579700 | - | Detail |
| C1H4g09996 | 4:25,478,430-25,481,611 | - | C2H4g28226 | - | LOC_Os04g49130 | Os04g0580400 | OsSCE3 | Detail |
| C1H4g17233 | 4:25,493,735-25,494,082 | + | - | - | - | - | - | Detail |
| C1H4g28417 | 4:25,494,507-25,500,090 | + | C2H4g28180 | CX4g036099 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| C1H4g25535 | 4:25,522,941-25,524,543 | - | - | CX12g016081 | LOC_Os12g18450 | - | - | Detail |
| C1H4g30271 | 4:25,528,884-25,529,605 | + | C2H4g16797 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g21644 | 4:25,533,632-25,535,003 | + | C2H4g02021 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g27247 | 4:25,536,556-25,537,960 | - | C2H4g17595 | CX4g034941 | LOC_Os04g49210 | Os04g0581100 | OsSAH3 | Detail |
| C1H4g19809 | 4:25,548,364-25,551,428 | - | C2H4g22618 | CX4g034701 | LOC_Os04g49220 | Os04g0581300 | - | Detail |
| C1H4g26375 | 4:25,602,473-25,602,983 | - | C2H4g27357 | CX4g036477 | LOC_Os04g49260 | Os04g0581800 | - | Detail |
| C1H4g04071 | 4:25,605,130-25,609,018 | - | C2H4g21103 | CX4g033493 | LOC_Os04g49270 | Os04g0582000 | OsDNA2_12 | Detail |
| C1H4g14184 | 4:25,610,403-25,615,940 | - | C2H4g08363 | CX4g033493 | LOC_Os04g49310 | Os04g0582600 | OsDNA2_13 | Detail |
| C1H4g22667 | 4:25,617,263-25,622,773 | - | C2H4g18439 | CX4g036138 | LOC_Os04g49320 | Os04g0582700 | OsDNA2_10 | Detail |
| C1H4g13543 | 4:25,624,250-25,626,330 | - | C2H4g27939 | CX4g036138 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037150 | 5:21,172,400-21,173,110 | + | C1H5g08854 | C2H5g06315 | LOC_Os05g43460 | Os05g0510100 | - | Detail |
| CX5g036841 | 5:21,174,405-21,178,310 | - | C1H5g22806 | C2H5g30303 | LOC_Os05g43470 | Os05g0510200 | - | Detail |
| CX5g039782 | 5:21,180,685-21,186,030 | + | C1H5g07819 | C2H5g11558 | LOC_Os05g43480 | Os05g0510300 | - | Detail |
| CX5g039818 | 5:21,189,654-21,190,892 | + | C1H5g09587 | C2H5g22480 | LOC_Os05g43490 | Os05g0510400 | - | Detail |
| CX5g039833 | 5:21,197,867-21,198,109 | - | - | C2H5g26605 | - | Os01g0184200 | - | Detail |
| CX5g039867 | 5:21,199,644-21,201,491 | - | C1H5g05512 | C2H5g22816 | LOC_Os05g43510 | Os05g0510600 | - | Detail |
| CX5g039522 | 5:21,205,395-21,205,888 | + | C1H5g15170 | C2H5g29168 | - | - | - | Detail |
| CX5g037054 | 5:21,212,034-21,217,545 | + | C1H5g30650 | C2H5g01065 | LOC_Os05g43610 | Os05g0512000 | - | Detail |
| CX5g038702 | 5:21,219,099-21,221,112 | + | C1H5g28010 | C2H5g14988 | LOC_Os05g43590 | Os05g0511800 | - | Detail |
| CX5g037699 | 5:21,222,893-21,224,805 | - | C1H5g12550 | C2H5g08259 | LOC_Os05g43582 | Os05g0511700 | - | Detail |
| CX5g037939 | 5:21,226,012-21,228,131 | - | C1H5g02902 | C2H5g13482 | LOC_Os05g43576 | Os05g0511500 | - | Detail |
| CX5g039648 | 5:21,233,678-21,240,020 | + | C1H5g23395 | C2H5g00019 | LOC_Os05g43570 | Os05g0511400 | - | Detail |
| CX5g038876 | 5:21,241,304-21,250,609 | + | C1H5g31163 | - | LOC_Os05g43560 | Os05g0511300 | - | Detail |
| CX5g038504 | 5:21,253,120-21,254,421 | - | C1H5g31608 | C2H5g05981 | LOC_Os05g43550 | Os05g0511050 | - | Detail |
| CX5g036939 | 5:21,255,636-21,257,739 | - | C1H5g23826 | C2H5g08192 | LOC_Os05g43540 | Os05g0511000 | - | Detail |
| CX5g037084 | 5:21,264,680-21,264,856 | + | - | - | - | Os02g0188201 | - | Detail |
| CX5g041060 | 5:21,266,252-21,269,592 | + | C1H5g01984 | C2H5g06890 | LOC_Os05g43530 | Os05g0510800 | OsCSLC7 | Detail |
| CX5g039667 | 5:21,272,019-21,275,391 | - | C1H5g13246 | C2H5g29614 | LOC_Os05g43520 | Os05g0510700 | - | Detail |
| CX5g040965 | 5:21,290,180-21,290,698 | + | C1H5g03553 | C2H5g06953 | LOC_Os05g43640 | Os05g0512100 | - | Detail |
| CX5g040742 | 5:21,293,404-21,296,189 | + | C1H5g21736 | C2H5g26211 | LOC_Os05g43650 | Os05g0512200 | - | Detail |