| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02984 | 5:20,766,428-20,768,903 | + | C2H5g16900 | CX5g039008 | LOC_Os05g43760 | Os05g0513100 | - | Detail |
| C1H5g10552 | 5:20,777,045-20,782,300 | + | C2H5g24258 | CX5g040071 | LOC_Os05g43770 | Os05g0513200 | - | Detail |
| C1H5g13302 | 5:20,784,428-20,787,309 | + | C2H5g09149 | CX5g039684 | LOC_Os05g43780 | Os05g0513350 | - | Detail |
| C1H5g09663 | 5:20,788,710-20,792,239 | + | C2H5g26918 | CX5g038930 | LOC_Os05g43790 | Os05g0513400 | - | Detail |
| C1H5g15162 | 5:20,796,959-20,798,329 | - | C2H5g05557 | CX5g036821 | LOC_Os05g43800 | Os05g0513600 | - | Detail |
| C1H5g20443 | 5:20,798,855-20,801,474 | - | C2H5g13727 | CX5g036949 | LOC_Os05g43810 | Os05g0513700 | - | Detail |
| C1H5g18479 | 5:20,805,058-20,806,808 | + | C2H5g12600 | CX5g036780 | LOC_Os05g43820 | Os05g0513800 | - | Detail |
| C1H5g21593 | 5:20,807,193-20,810,906 | - | C2H5g13306 | CX5g040516 | LOC_Os05g43830 | Os05g0513900 | - | Detail |
| C1H5g29251 | 5:20,819,862-20,821,397 | + | C2H5g05539 | CX5g039381 | LOC_Os05g43840 | Os05g0514200 | - | Detail |
| C1H5g31291 | 5:20,827,649-20,832,191 | + | C2H5g17185 | CX5g039707 | LOC_Os05g43850 | Os05g0514300 | - | Detail |
| C1H5g31864 | 5:20,833,121-20,835,287 | - | C2H5g21883 | CX5g039655 | LOC_Os05g43860 | Os05g0514400 | - | Detail |
| C1H5g13883 | 5:20,837,871-20,840,000 | + | C2H5g27546 | CX5g039558 | LOC_Os05g43870 | Os05g0514500 | - | Detail |
| C1H5g27703 | 5:20,845,140-20,846,294 | - | C2H5g19387 | CX5g037140 | LOC_Os05g43880 | Os05g0514600 | GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4 | Detail |
| C1H5g12361 | 5:20,857,303-20,857,548 | + | C2H5g15452 | CX5g039348 | LOC_Os05g43895 | Os05g0514800 | - | Detail |
| C1H5g18846 | 5:20,865,640-20,867,343 | + | C2H5g22372 | CX5g037416 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| C1H5g31857 | 5:20,876,503-20,881,955 | + | C2H5g05053 | CX5g037729 | LOC_Os05g43920 | Os05g0515400 | OsARF14, OsARF3la, OsARF3la/OsARF14 | Detail |
| C1H5g21636 | 5:20,886,010-20,887,710 | - | C2H5g07980 | CX5g038512 | LOC_Os05g43940 | Os05g0515600 | OsCOMT9 | Detail |
| C1H5g00839 | 5:20,891,917-20,895,618 | + | C2H5g04015 | CX5g037498 | LOC_Os05g43950 | Os05g0515700 | OsVOZ2 | Detail |
| C1H5g13776 | 5:20,896,372-20,898,026 | - | C2H5g16276 | CX5g039793 | LOC_Os05g43960 | Os05g0415400 | OsNAC24 | Detail |
| C1H5g03749 | 5:20,898,386-20,902,248 | + | C2H5g17758 | CX5g038707 | LOC_Os05g43970 | Os05g0515900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039378 | 5:21,068,529-21,068,870 | + | C1H5g05296 | C2H5g17893 | - | Os05g0429100 | - | Detail |
| CX5g040514 | 5:21,070,192-21,070,542 | + | - | - | - | Os03g0229000 | - | Detail |
| CX5g040368 | 5:21,072,131-21,072,352 | + | - | - | - | Os12g0568166 | - | Detail |
| CX5g036865 | 5:21,078,738-21,082,078 | + | C1H5g04787 | C2H5g13301 | LOC_Os05g43230 | Os05g0508300 | - | Detail |
| CX5g036817 | 5:21,083,845-21,088,047 | + | C1H5g17723 | C2H5g18645 | LOC_Os05g43240 | Os05g0508400 | - | Detail |
| CX5g039246 | 5:21,090,305-21,091,889 | + | C1H5g24403 | C2H5g18041 | - | Os05g0169000 | - | Detail |
| CX5g040481 | 5:21,092,882-21,095,020 | + | C1H5g06065 | C2H5g09062 | LOC_Os05g43252 | Os05g0508500 | OsTrxh2 | Detail |
| CX5g036989 | 5:21,096,805-21,099,114 | + | - | C2H5g04532 | - | - | - | Detail |
| CX5g040869 | 5:21,105,991-21,108,107 | + | - | C2H5g27308 | - | - | - | Detail |
| CX5g038536 | 5:21,114,622-21,125,161 | + | C1H5g01563 | C2H5g17689 | LOC_Os05g43280 | Os05g0508700 | - | Detail |
| CX5g041072 | 5:21,127,770-21,131,845 | + | C1H5g09451 | C2H5g12299 | LOC_Os05g43300 | Os05g0508800 | - | Detail |
| CX5g039371 | 5:21,134,225-21,134,846 | + | C1H5g08280 | C2H5g28018 | LOC_Os05g43310 | Os05g0508900 | - | Detail |
| CX5g037153 | 5:21,137,127-21,140,049 | + | C1H5g11413 | C2H5g05240 | LOC_Os05g43360 | Os05g0509200 | - | Detail |
| CX5g039836 | 5:21,141,076-21,146,976 | + | C1H5g23290 | C2H5g08227 | LOC_Os05g43374 | Os05g0509300 | - | Detail |
| CX5g038317 | 5:21,147,448-21,149,663 | - | C1H5g18210 | C2H5g21027 | LOC_Os05g43380 | Os05g0509400 | - | Detail |
| CX5g039669 | 5:21,150,972-21,151,610 | + | - | - | - | - | - | Detail |
| CX5g039296 | 5:21,153,746-21,156,663 | - | C1H5g09672 | C2H5g23315 | LOC_Os05g43390 | Os05g0509500 | - | Detail |
| CX5g041045 | 5:21,162,367-21,162,699 | + | C1H5g24566 | C2H5g08602 | LOC_Os05g44410 | Os05g0509800 | - | Detail |
| CX5g041066 | 5:21,163,788-21,165,018 | - | C1H5g06721 | C2H5g17414 | LOC_Os05g43440 | Os05g0509700 | OsmtSSB1, TA1 | Detail |
| CX5g040440 | 5:21,167,395-21,169,630 | - | C1H5g24969 | C2H5g13885 | LOC_Os05g43450 | Os05g0509900 | - | Detail |