| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00884 | 2:3,812,648-3,816,106 | + | C2H2g11136 | CX2g022017 | LOC_Os02g08260 | Os02g0179100 | - | Detail |
| C1H2g27338 | 2:3,818,986-3,821,778 | - | C2H2g22090 | CX2g024480 | LOC_Os02g08270 | Os02g0179200 | - | Detail |
| C1H2g15683 | 2:3,827,546-3,832,508 | + | C2H2g18129 | CX2g023864 | LOC_Os02g08300 | Os02g0179300 | - | Detail |
| C1H2g09345 | 2:3,832,904-3,835,074 | - | C2H2g12176 | CX2g022399 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| C1H2g30953 | 2:3,841,510-3,845,473 | + | C2H2g24288 | CX2g020585 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| C1H2g15298 | 2:3,846,555-3,848,540 | - | - | CX2g020007 | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| C1H2g23751 | 2:3,850,541-3,855,785 | - | C2H2g01634 | CX2g020510 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| C1H2g17009 | 2:3,857,894-3,866,840 | + | C2H2g05800 | CX2g023636 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| C1H2g04017 | 2:3,868,337-3,872,818 | + | C2H2g08895 | CX2g019636 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| C1H2g13865 | 2:3,873,173-3,875,364 | - | C2H2g28931 | CX2g022824 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| C1H2g02146 | 2:3,877,404-3,880,606 | + | C2H2g25419 | CX2g023398 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| C1H2g01164 | 2:3,896,213-3,897,816 | + | C2H2g28103 | CX2g022601 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| C1H2g08033 | 2:3,901,028-3,903,545 | - | C2H2g19969 | CX2g022893 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| C1H2g12941 | 2:3,907,813-3,910,813 | + | C2H2g21393 | CX2g022487 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| C1H2g19399 | 2:3,963,157-3,965,142 | + | C2H2g08597 | CX2g020326 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| C1H2g31251 | 2:3,977,406-3,978,517 | + | C2H2g13400 | CX2g018962 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| C1H2g13602 | 2:3,981,671-3,985,149 | + | C2H2g22677 | CX2g021549 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| C1H2g14304 | 2:3,986,063-3,991,419 | - | C2H2g06559 | CX2g021572 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| C1H2g19533 | 2:3,992,506-3,997,145 | - | C2H2g18423 | CX2g020537 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| C1H2g06188 | 2:4,014,849-4,015,442 | - | C2H2g14863 | CX2g019859 | LOC_Os02g08510 | Os02g0182300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040519 | 5:20,833,323-20,838,313 | + | C1H5g17054 | C2H5g18831 | LOC_Os05g42270 | Os05g0502200 | - | Detail |
| CX5g040478 | 5:20,842,167-20,844,707 | - | C1H5g06217 | C2H5g21255 | LOC_Os05g42280 | Os05g0502500 | - | Detail |
| CX5g037515 | 5:20,846,978-20,848,527 | + | C1H5g22762 | C2H5g19742 | LOC_Os05g42290 | Os05g0502700 | - | Detail |
| CX5g039451 | 5:20,851,730-20,854,733 | - | C1H5g20863 | C2H5g01889 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| CX5g038016 | 5:20,858,286-20,858,747 | + | C1H5g12553 | C2H5g24320 | - | - | - | Detail |
| CX5g039517 | 5:20,859,612-20,860,148 | + | - | - | - | - | - | Detail |
| CX5g037993 | 5:20,863,420-20,863,683 | - | - | - | - | - | - | Detail |
| CX5g036854 | 5:20,865,982-20,871,488 | - | C1H5g23445 | C2H5g12051 | LOC_Os05g42330 | Os05g0503000 | - | Detail |
| CX5g038805 | 5:20,874,592-20,875,512 | + | C1H5g08819 | C2H5g11517 | LOC_Os05g42340 | Os05g0503100 | - | Detail |
| CX5g039611 | 5:20,877,596-20,882,093 | - | C1H5g25114 | C2H5g22444 | LOC_Os05g42350 | Os05g0503300 | - | Detail |
| CX5g040265 | 5:20,928,884-20,930,808 | - | C1H5g03299 | C2H5g04107 | LOC_Os05g43030 | Os05g0505900 | - | Detail |
| CX5g037777 | 5:20,938,777-20,940,595 | + | C1H5g03689 | C2H5g04456 | LOC_Os05g43040 | Os05g0506000 | - | Detail |
| CX5g039788 | 5:20,941,795-20,942,849 | - | C1H5g13929 | C2H5g11826 | LOC_Os05g43050 | Os05g0345700 | - | Detail |
| CX5g037317 | 5:20,944,832-20,955,572 | + | C1H5g16325 | C2H5g03697 | LOC_Os05g43060 | Os05g0506200 | - | Detail |
| CX5g036738 | 5:20,958,803-20,961,609 | - | C1H5g21928 | C2H5g01596 | LOC_Os05g43070 | - | - | Detail |
| CX5g038198 | 5:20,984,293-20,993,102 | - | C1H5g17334 | C2H5g12001 | LOC_Os05g43120 | Os05g0506800 | - | Detail |
| CX5g039806 | 5:20,995,401-20,997,040 | - | C1H5g14528 | C2H5g02931 | LOC_Os05g43130 | Os05g0506900 | - | Detail |
| CX5g038837 | 5:21,003,614-21,007,523 | + | C1H5g16549 | C2H5g14601 | LOC_Os05g43170 | Os05g0507300 | - | Detail |
| CX5g040466 | 5:21,062,925-21,063,954 | - | C1H5g05296 | C2H5g22490 | - | Os07g0631500 | - | Detail |
| CX5g038889 | 5:21,068,034-21,068,438 | + | - | C2H12g29113 | - | - | - | Detail |