| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26145 | 1:17,380,958-17,391,445 | + | C1H1g30357 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C2H1g21205 | 1:17,411,129-17,412,480 | + | C1H1g25202 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C2H1g18568 | 1:17,430,070-17,433,767 | + | C1H1g08450 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C2H1g11782 | 1:17,436,425-17,439,737 | + | C1H1g10941 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C2H1g13197 | 1:17,448,535-17,456,498 | + | C1H1g09014 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C2H1g22021 | 1:17,484,938-17,486,550 | + | C1H1g03031 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C2H1g01344 | 1:17,499,948-17,510,518 | + | C1H1g05337 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C2H1g28979 | 1:17,563,858-17,564,544 | + | C1H1g08661 | - | - | - | - | Detail |
| C2H1g17057 | 1:17,566,324-17,569,069 | + | C1H1g01010 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C2H1g19688 | 1:17,570,292-17,573,584 | + | C1H1g10979 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C2H1g06550 | 1:17,610,748-17,626,534 | + | C1H1g28687 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C2H1g06422 | 1:17,627,454-17,632,664 | - | C1H1g03628 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C2H1g29503 | 1:17,637,195-17,642,074 | - | C1H1g18093 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C2H1g02847 | 1:17,644,764-17,656,610 | + | C1H1g30321 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| C2H1g18148 | 1:17,670,542-17,674,451 | + | C1H1g07483 | CX1g005291 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| C2H1g18703 | 1:17,680,683-17,681,510 | + | C1H1g28876 | CX1g001971 | LOC_Os10g41640 | Os01g0882200 | - | Detail |
| C2H1g14328 | 1:17,743,444-17,747,974 | + | C1H1g30939 | CX1g007129 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| C2H1g24993 | 1:17,749,795-17,750,411 | + | C1H1g00833 | - | - | Os01g0530341 | - | Detail |
| C2H1g24220 | 1:17,750,861-17,753,176 | + | C1H1g19948 | CX5g040030 | LOC_Os01g34614 | Os01g0530366 | - | Detail |
| C2H1g14488 | 1:17,756,204-17,758,500 | + | C1H1g13045 | CX1g002051 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038926 | 5:20,611,983-20,612,135 | - | - | - | - | Os01g0728000 | - | Detail |
| CX5g039317 | 5:20,626,269-20,631,091 | - | C1H5g01822 | C2H5g00564 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| CX5g040928 | 5:20,634,189-20,639,317 | + | C1H5g17713 | C2H5g16839 | LOC_Os05g41795 | Os05g0497600 | OsAIR1, AIR1 | Detail |
| CX5g039298 | 5:20,641,692-20,643,681 | + | C1H5g13253 | C2H5g11087 | LOC_Os05g41800 | Os05g0497675 | - | Detail |
| CX5g040599 | 5:20,644,627-20,649,732 | - | C1H5g27914 | C2H5g10568 | LOC_Os05g41810 | Os05g0497700 | - | Detail |
| CX5g039834 | 5:20,661,806-20,662,378 | - | C1H5g15467 | C2H5g27281 | LOC_Os05g41870 | Os05g0498200 | - | Detail |
| CX5g038090 | 5:20,664,414-20,675,244 | + | C1H5g00818 | C2H5g03550 | LOC_Os05g41880 | Os05g0498300 | OsMSH5 | Detail |
| CX5g041007 | 5:20,677,372-20,678,224 | + | C1H5g23053 | C2H5g07561 | LOC_Os05g41900 | Os05g0498400 | - | Detail |
| CX5g037671 | 5:20,681,306-20,684,422 | - | C1H5g22087 | C2H5g20540 | LOC_Os05g41910 | Os05g0498500 | - | Detail |
| CX5g036819 | 5:20,692,915-20,694,875 | - | C1H5g16508 | C2H5g08647 | LOC_Os05g41930 | Os05g0498700 | OsNRP5 | Detail |
| CX5g038704 | 5:20,695,280-20,695,456 | - | C1H4g20138 | - | - | - | - | Detail |
| CX5g038006 | 5:20,701,816-20,704,451 | - | C1H5g11668 | C2H5g02834 | LOC_Os05g41950 | Os05g0498900 | - | Detail |
| CX5g038210 | 5:20,705,755-20,706,333 | - | C1H5g27146 | C2H5g07577 | LOC_Os05g41970 | Os05g0499100 | - | Detail |
| CX5g040034 | 5:20,707,089-20,707,586 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX5g036827 | 5:20,708,688-20,708,864 | + | - | - | - | - | - | Detail |
| CX5g037732 | 5:20,711,414-20,712,707 | + | C1H5g01020 | C2H5g10838 | LOC_Os05g41990 | Os05g0499300 | - | Detail |
| CX5g037740 | 5:20,715,152-20,716,488 | + | C1H5g03879 | C2H5g21405 | LOC_Os05g42000 | Os05g0499400 | - | Detail |
| CX5g037878 | 5:20,716,932-20,720,962 | - | C1H5g13308 | C2H5g23263 | LOC_Os05g42010 | Os05g0499500 | - | Detail |
| CX5g038550 | 5:20,722,485-20,723,966 | + | C1H5g01320 | C2H5g04911 | LOC_Os05g42020 | Os05g0499600 | - | Detail |
| CX5g038976 | 5:20,728,359-20,729,813 | + | C1H5g19452 | C2H5g10638 | LOC_Os05g42040 | Os05g0499800 | - | Detail |