| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08740 | 4:5,837,219-5,840,950 | + | C1H4g27268 | CX4g033727 | LOC_Os04g11760 | Os04g0193950 | - | Detail |
| C2H4g24115 | 4:5,863,103-5,863,795 | + | C1H4g00127 | CX4g034119 | - | - | - | Detail |
| C2H4g01433 | 4:5,877,746-5,884,336 | - | C1H4g11202 | CX4g032821 | LOC_Os04g11820 | Os04g0194500 | - | Detail |
| C2H4g23993 | 4:5,907,269-5,914,707 | + | C1H4g19431 | CX4g034386 | LOC_Os04g11880 | Os04g0195000 | - | Detail |
| C2H4g11331 | 4:5,933,106-5,934,673 | + | C1H4g25694 | CX4g035968 | LOC_Os08g24980 | - | - | Detail |
| C2H4g08911 | 4:5,953,713-5,956,448 | + | C1H4g19937 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C2H4g17260 | 4:5,977,877-5,980,574 | - | C1H4g07183 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C2H4g14785 | 4:6,313,890-6,316,207 | - | C1H4g14978 | CX4g034359 | LOC_Os04g12390 | Os04g0330200 | - | Detail |
| C2H4g03396 | 4:6,335,305-6,336,315 | + | - | CX4g032415 | LOC_Os04g12430 | Os04g0200700 | - | Detail |
| C2H4g26962 | 4:6,336,510-6,342,139 | + | - | CX4g032415 | LOC_Os04g12430 | - | - | Detail |
| C2H4g06118 | 4:6,346,027-6,353,840 | - | - | CX4g031446 | - | - | - | Detail |
| C2H4g10504 | 4:6,362,734-6,369,160 | - | C1H4g16105 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C2H4g26946 | 4:6,396,910-6,405,329 | - | C1H4g17374 | CX4g036106 | LOC_Os04g12499 | Os04g0201500 | OsAAT30 | Detail |
| C2H4g03852 | 4:6,416,375-6,420,043 | - | C1H4g14971 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C2H4g15231 | 4:6,427,164-6,428,727 | + | - | - | - | - | - | Detail |
| C2H4g12193 | 4:6,428,170-6,430,605 | - | C1H4g17048 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C2H4g26627 | 4:6,448,193-6,448,576 | - | - | - | - | Os04g0617200 | - | Detail |
| C2H4g18743 | 4:6,463,388-6,466,416 | - | C1H4g18742 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C2H4g09802 | 4:6,477,598-6,478,724 | + | C1H4g19896 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C2H4g10760 | 4:6,479,684-6,480,995 | + | C1H4g09867 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038926 | 5:20,611,983-20,612,135 | - | - | - | - | Os01g0728000 | - | Detail |
| CX5g039317 | 5:20,626,269-20,631,091 | - | C1H5g01822 | C2H5g00564 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| CX5g040928 | 5:20,634,189-20,639,317 | + | C1H5g17713 | C2H5g16839 | LOC_Os05g41795 | Os05g0497600 | OsAIR1, AIR1 | Detail |
| CX5g039298 | 5:20,641,692-20,643,681 | + | C1H5g13253 | C2H5g11087 | LOC_Os05g41800 | Os05g0497675 | - | Detail |
| CX5g040599 | 5:20,644,627-20,649,732 | - | C1H5g27914 | C2H5g10568 | LOC_Os05g41810 | Os05g0497700 | - | Detail |
| CX5g039834 | 5:20,661,806-20,662,378 | - | C1H5g15467 | C2H5g27281 | LOC_Os05g41870 | Os05g0498200 | - | Detail |
| CX5g038090 | 5:20,664,414-20,675,244 | + | C1H5g00818 | C2H5g03550 | LOC_Os05g41880 | Os05g0498300 | OsMSH5 | Detail |
| CX5g041007 | 5:20,677,372-20,678,224 | + | C1H5g23053 | C2H5g07561 | LOC_Os05g41900 | Os05g0498400 | - | Detail |
| CX5g037671 | 5:20,681,306-20,684,422 | - | C1H5g22087 | C2H5g20540 | LOC_Os05g41910 | Os05g0498500 | - | Detail |
| CX5g036819 | 5:20,692,915-20,694,875 | - | C1H5g16508 | C2H5g08647 | LOC_Os05g41930 | Os05g0498700 | OsNRP5 | Detail |
| CX5g038704 | 5:20,695,280-20,695,456 | - | C1H4g20138 | - | - | - | - | Detail |
| CX5g038006 | 5:20,701,816-20,704,451 | - | C1H5g11668 | C2H5g02834 | LOC_Os05g41950 | Os05g0498900 | - | Detail |
| CX5g038210 | 5:20,705,755-20,706,333 | - | C1H5g27146 | C2H5g07577 | LOC_Os05g41970 | Os05g0499100 | - | Detail |
| CX5g040034 | 5:20,707,089-20,707,586 | - | C1H8g13263 | - | LOC_Os11g39380 | - | - | Detail |
| CX5g036827 | 5:20,708,688-20,708,864 | + | - | - | - | - | - | Detail |
| CX5g037732 | 5:20,711,414-20,712,707 | + | C1H5g01020 | C2H5g10838 | LOC_Os05g41990 | Os05g0499300 | - | Detail |
| CX5g037740 | 5:20,715,152-20,716,488 | + | C1H5g03879 | C2H5g21405 | LOC_Os05g42000 | Os05g0499400 | - | Detail |
| CX5g037878 | 5:20,716,932-20,720,962 | - | C1H5g13308 | C2H5g23263 | LOC_Os05g42010 | Os05g0499500 | - | Detail |
| CX5g038550 | 5:20,722,485-20,723,966 | + | C1H5g01320 | C2H5g04911 | LOC_Os05g42020 | Os05g0499600 | - | Detail |
| CX5g038976 | 5:20,728,359-20,729,813 | + | C1H5g19452 | C2H5g10638 | LOC_Os05g42040 | Os05g0499800 | - | Detail |