| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21952 | 3:2,706,336-2,707,098 | + | - | - | LOC_Os03g06250 | Os03g0158600 | - | Detail |
| C2H3g18282 | 3:2,710,130-2,714,536 | - | C1H3g08402 | CX3g030115 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g21729 | 3:2,714,937-2,716,403 | + | C1H3g27159 | CX3g028779 | LOC_Os03g13230 | Os03g0158900 | - | Detail |
| C2H3g27396 | 3:2,716,574-2,719,895 | - | C1H3g28868 | CX3g025128 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| C2H3g05214 | 3:2,723,208-2,726,317 | + | C1H3g19166 | CX3g026196 | LOC_Os03g06330 | Os03g0159100 | - | Detail |
| C2H3g05736 | 3:2,728,005-2,734,714 | + | C1H3g00562 | CX3g029258 | LOC_Os03g06340 | Os03g0159200 | - | Detail |
| C2H3g02146 | 3:2,736,955-2,737,632 | - | C1H3g03543 | CX3g031270 | LOC_Os03g06350 | Os03g0159400 | - | Detail |
| C2H3g07500 | 3:2,742,445-2,743,445 | - | C1H3g19003 | CX3g027894 | LOC_Os03g06360 | Os03g0159600 | - | Detail |
| C2H3g25960 | 3:2,744,050-2,745,670 | + | C1H3g22077 | CX3g031117 | LOC_Os03g06370 | Os03g0159700 | OsNBL3 | Detail |
| C2H3g24140 | 3:2,749,659-2,750,132 | - | C1H3g26257 | CX3g025627 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| C2H3g08821 | 3:2,754,362-2,761,304 | + | C1H3g14921 | CX3g025658 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| C2H3g02952 | 3:2,761,840-2,764,637 | + | C1H3g04551 | - | - | - | - | Detail |
| C2H3g01208 | 3:2,765,754-2,766,050 | - | C1H3g16143 | CX3g027015 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| C2H3g27894 | 3:2,768,854-2,773,180 | - | C1H3g24862 | CX3g030159 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| C2H3g10921 | 3:2,782,383-2,785,427 | - | C1H3g27076 | CX3g027024 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| C2H3g17145 | 3:2,795,605-2,796,258 | - | C1H3g12946 | CX3g031001 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| C2H3g18147 | 3:2,804,232-2,804,662 | + | C1H3g01001 | - | LOC_Os03g06490 | Os03g0161000 | - | Detail |
| C2H3g23882 | 3:2,804,963-2,805,248 | + | C1H3g27407 | CX3g025715 | - | - | - | Detail |
| C2H3g19291 | 3:2,807,664-2,808,054 | + | C1H3g20415 | CX3g025715 | - | - | - | Detail |
| C2H3g21331 | 3:2,811,186-2,812,513 | + | C1H3g11018 | - | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038921 | 5:20,323,917-20,326,774 | - | C1H5g31086 | C2H5g07145 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| CX5g037848 | 5:20,331,733-20,333,751 | - | C1H5g16631 | C2H5g25171 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| CX5g036846 | 5:20,335,940-20,336,233 | - | - | - | - | - | - | Detail |
| CX5g037157 | 5:20,337,515-20,340,374 | - | C1H5g03177 | C2H5g06467 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| CX5g040781 | 5:20,349,331-20,357,307 | - | C1H5g22455 | C2H5g10562 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| CX5g038007 | 5:20,387,929-20,388,495 | - | C1H5g20980 | C2H5g22106 | LOC_Os05g41250 | Os05g0491700 | - | Detail |
| CX5g040451 | 5:20,391,844-20,394,150 | - | C1H5g30902 | C2H5g21965 | LOC_Os05g41270 | Os05g0491900 | OsCPK14 | Detail |
| CX5g040156 | 5:20,402,161-20,405,535 | + | C1H5g27219 | C2H5g02635 | LOC_Os05g41290 | Os05g0492200 | - | Detail |
| CX5g038782 | 5:20,408,398-20,411,763 | + | C1H5g10780 | C2H5g19061 | LOC_Os05g41310 | Os05g0492600 | - | Detail |
| CX5g041141 | 5:20,415,059-20,424,168 | - | C1H5g26798 | C2H5g05724 | LOC_Os05g40730 | - | - | Detail |
| CX5g037637 | 5:20,425,596-20,428,192 | - | C1H5g26798 | C2H5g11046 | LOC_Os05g40730 | - | - | Detail |
| CX5g041000 | 5:20,430,401-20,434,578 | + | C1H5g03494 | C2H5g17631 | LOC_Os05g41370 | Os05g0493100 | - | Detail |
| CX5g038543 | 5:20,436,969-20,438,589 | + | - | - | LOC_Os05g41380 | - | - | Detail |
| CX5g037871 | 5:20,440,852-20,443,319 | + | C1H5g10631 | C2H5g00500 | LOC_Os05g41390 | Os05g0493500 | - | Detail |
| CX5g037681 | 5:20,447,152-20,448,617 | - | C1H5g02448 | C2H5g02711 | LOC_Os05g41400 | Os05g0493600 | - | Detail |
| CX5g039492 | 5:20,458,344-20,460,273 | + | C1H5g24117 | C2H5g25483 | LOC_Os05g41420 | Os05g0493800 | - | Detail |
| CX5g037576 | 5:20,469,533-20,473,313 | + | C1H5g15971 | C2H5g27840 | LOC_Os05g41440 | Os05g0494000 | OsC3'H1, CYP98A4 | Detail |
| CX5g040207 | 5:20,475,100-20,479,091 | + | C1H5g14365 | C2H5g22696 | LOC_Os05g41450 | Os05g0494100 | DRAP2, OsDrAp2, OsHAPL1 | Detail |
| CX5g039984 | 5:20,479,953-20,480,507 | - | C1H5g30644 | C2H5g26776 | LOC_Os05g41460 | Os05g0494200 | OC-II, OC-III | Detail |
| CX5g039879 | 5:20,486,496-20,487,563 | + | C1H5g25577 | C2H5g13599 | LOC_Os05g41480 | Os05g0494500 | - | Detail |