| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g14560 | 9:18,510,240-18,511,177 | - | - | - | - | Os09g0551000 | - | Detail |
| C2H9g15560 | 9:18,511,260-18,519,351 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37834 | Os09g0551000 | - | Detail |
| C2H9g18567 | 9:18,519,786-18,522,730 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g30036 | 9:18,524,325-18,526,305 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g10203 | 9:18,526,418-18,530,520 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551251 | SDK11 | Detail |
| C2H9g23601 | 9:18,536,271-18,541,647 | + | C1H9g23922 | CX9g055805 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| C2H9g18325 | 9:18,549,604-18,553,469 | + | C1H9g22027 | CX9g057667 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| C2H9g05665 | 9:18,554,819-18,560,466 | - | C1H9g23767 | CX9g057667 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| C2H9g09248 | 9:18,564,920-18,566,709 | + | C1H9g20157 | CX9g055996 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| C2H9g00765 | 9:18,568,706-18,576,273 | - | C1H9g09501 | CX9g055169 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| C2H9g18827 | 9:18,576,747-18,585,978 | - | C1H9g15933 | CX9g057646 | LOC_Os09g37930 | - | - | Detail |
| C2H9g26371 | 9:18,591,347-18,594,122 | - | C1H9g08089 | CX9g054990 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| C2H9g23182 | 9:18,597,456-18,599,241 | - | C1H9g25273 | CX9g055948 | LOC_Os09g37958 | Os09g0552600 | - | Detail |
| C2H9g28554 | 9:18,601,445-18,602,602 | - | C1H9g09840 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C2H9g14226 | 9:18,606,239-18,608,507 | + | C1H9g15676 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C2H9g12533 | 9:18,611,084-18,613,215 | + | C1H9g26813 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C2H9g10941 | 9:18,620,794-18,625,942 | + | C1H9g17635 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C2H9g21953 | 9:18,626,744-18,629,492 | - | C1H9g26934 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C2H9g19006 | 9:18,634,233-18,638,099 | + | C1H9g10869 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C2H9g11910 | 9:18,640,615-18,641,481 | - | C1H9g05696 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038921 | 5:20,323,917-20,326,774 | - | C1H5g31086 | C2H5g07145 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| CX5g037848 | 5:20,331,733-20,333,751 | - | C1H5g16631 | C2H5g25171 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| CX5g036846 | 5:20,335,940-20,336,233 | - | - | - | - | - | - | Detail |
| CX5g037157 | 5:20,337,515-20,340,374 | - | C1H5g03177 | C2H5g06467 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| CX5g040781 | 5:20,349,331-20,357,307 | - | C1H5g22455 | C2H5g10562 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| CX5g038007 | 5:20,387,929-20,388,495 | - | C1H5g20980 | C2H5g22106 | LOC_Os05g41250 | Os05g0491700 | - | Detail |
| CX5g040451 | 5:20,391,844-20,394,150 | - | C1H5g30902 | C2H5g21965 | LOC_Os05g41270 | Os05g0491900 | OsCPK14 | Detail |
| CX5g040156 | 5:20,402,161-20,405,535 | + | C1H5g27219 | C2H5g02635 | LOC_Os05g41290 | Os05g0492200 | - | Detail |
| CX5g038782 | 5:20,408,398-20,411,763 | + | C1H5g10780 | C2H5g19061 | LOC_Os05g41310 | Os05g0492600 | - | Detail |
| CX5g041141 | 5:20,415,059-20,424,168 | - | C1H5g26798 | C2H5g05724 | LOC_Os05g40730 | - | - | Detail |
| CX5g037637 | 5:20,425,596-20,428,192 | - | C1H5g26798 | C2H5g11046 | LOC_Os05g40730 | - | - | Detail |
| CX5g041000 | 5:20,430,401-20,434,578 | + | C1H5g03494 | C2H5g17631 | LOC_Os05g41370 | Os05g0493100 | - | Detail |
| CX5g038543 | 5:20,436,969-20,438,589 | + | - | - | LOC_Os05g41380 | - | - | Detail |
| CX5g037871 | 5:20,440,852-20,443,319 | + | C1H5g10631 | C2H5g00500 | LOC_Os05g41390 | Os05g0493500 | - | Detail |
| CX5g037681 | 5:20,447,152-20,448,617 | - | C1H5g02448 | C2H5g02711 | LOC_Os05g41400 | Os05g0493600 | - | Detail |
| CX5g039492 | 5:20,458,344-20,460,273 | + | C1H5g24117 | C2H5g25483 | LOC_Os05g41420 | Os05g0493800 | - | Detail |
| CX5g037576 | 5:20,469,533-20,473,313 | + | C1H5g15971 | C2H5g27840 | LOC_Os05g41440 | Os05g0494000 | OsC3'H1, CYP98A4 | Detail |
| CX5g040207 | 5:20,475,100-20,479,091 | + | C1H5g14365 | C2H5g22696 | LOC_Os05g41450 | Os05g0494100 | DRAP2, OsDrAp2, OsHAPL1 | Detail |
| CX5g039984 | 5:20,479,953-20,480,507 | - | C1H5g30644 | C2H5g26776 | LOC_Os05g41460 | Os05g0494200 | OC-II, OC-III | Detail |
| CX5g039879 | 5:20,486,496-20,487,563 | + | C1H5g25577 | C2H5g13599 | LOC_Os05g41480 | Os05g0494500 | - | Detail |