| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15486 | 9:16,282,980-16,286,853 | - | C1H9g11515 | CX9g056637 | LOC_Os09g32380 | Os09g0499600 | - | Detail |
| C2H9g14862 | 9:16,287,111-16,289,956 | - | C1H9g14204 | CX9g055955 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| C2H9g30463 | 9:16,292,392-16,294,856 | - | C1H9g03497 | CX9g055955 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| C2H9g09805 | 9:16,297,061-16,299,645 | - | C1H9g08634 | CX9g057000 | LOC_Os09g32430 | Os09g0500200 | - | Detail |
| C2H9g15110 | 9:16,302,156-16,307,368 | + | C1H9g11307 | CX9g056675 | LOC_Os09g32440 | Os09g0500300 | - | Detail |
| C2H9g01534 | 9:16,308,278-16,316,409 | + | C1H9g04482 | CX9g054850 | LOC_Os09g32450 | Os09g0500600 | - | Detail |
| C2H9g04091 | 9:16,318,253-16,320,599 | - | C1H9g28494 | CX9g057355 | LOC_Os09g32470 | Os09g0500900 | - | Detail |
| C2H9g21146 | 9:16,326,844-16,328,497 | + | C1H9g28322 | CX9g056949 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| C2H9g26241 | 9:16,334,496-16,336,253 | - | C1H9g06581 | CX9g056092 | LOC_Os09g32510 | Os09g0501600 | OsbHLH92, Lam1 | Detail |
| C2H9g30383 | 9:16,340,993-16,342,191 | - | C1H9g28322 | CX9g057819 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| C2H9g27344 | 9:16,343,016-16,345,599 | - | C1H9g00140 | CX9g054899 | LOC_Os09g32526 | Os09g0501850 | - | Detail |
| C2H9g16977 | 9:16,346,970-16,348,740 | - | C1H9g28322 | CX9g055348 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| C2H9g09975 | 9:16,352,566-16,358,636 | - | C1H9g08567 | CX9g055824 | LOC_Os09g32540 | Os09g0502100 | LGD1, LGD1.6 | Detail |
| C2H9g02889 | 9:16,361,701-16,366,350 | - | C1H9g16225 | CX9g056540 | LOC_Os09g32550 | Os09g0502200 | - | Detail |
| C2H9g24651 | 9:16,369,678-16,371,016 | + | C1H9g10007 | CX9g054956 | LOC_Os09g32570 | Os09g0502500 | - | Detail |
| C2H9g09324 | 9:16,371,882-16,374,257 | - | C1H9g19163 | CX9g055341 | LOC_Os09g32580 | Os09g0502600 | - | Detail |
| C2H9g03031 | 9:16,375,236-16,378,113 | - | C1H9g15268 | CX9g055341 | LOC_Os09g32600 | Os09g0502800 | - | Detail |
| C2H9g18676 | 9:16,378,457-16,380,710 | - | C1H4g10643 | CX2g022959 | LOC_Os10g10750 | - | - | Detail |
| C2H9g01105 | 9:16,385,239-16,387,977 | - | C1H9g19813 | CX9g056272 | LOC_Os09g28370 | Os07g0255200 | - | Detail |
| C2H9g21589 | 9:16,395,690-16,396,584 | - | C1H2g20967 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039977 | 5:20,231,347-20,231,574 | - | - | - | - | - | - | Detail |
| CX5g038773 | 5:20,235,278-20,235,994 | + | C1H5g03150 | C2H5g28435 | LOC_Os05g40950 | Os05g0488500 | - | Detail |
| CX5g037471 | 5:20,237,185-20,239,217 | - | C1H5g10864 | C2H5g15684 | LOC_Os05g40960 | Os05g0488600 | - | Detail |
| CX5g036864 | 5:20,245,953-20,246,924 | - | C1H5g29301 | C2H5g10762 | LOC_Os05g40980 | Os05g0488800 | OsSIRP1, SIRP1 | Detail |
| CX5g038499 | 5:20,249,454-20,252,049 | + | C1H5g30435 | C2H5g22368 | LOC_Os05g40990 | Os05g0488900 | - | Detail |
| CX5g038470 | 5:20,255,764-20,260,075 | + | C1H5g00494 | C2H5g07104 | LOC_Os05g41000 | Os05g0489000 | - | Detail |
| CX5g040097 | 5:20,263,123-20,265,333 | + | C1H5g12778 | C2H5g00595 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| CX5g037795 | 5:20,269,498-20,269,914 | - | C1H5g05615 | C2H5g15924 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| CX5g037436 | 5:20,273,734-20,275,915 | - | C1H5g29364 | C2H5g27372 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| CX5g037252 | 5:20,279,882-20,282,254 | + | C1H5g11382 | C2H5g09500 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| CX5g039059 | 5:20,283,914-20,284,180 | + | C1H5g00326 | C2H5g01943 | - | Os05g0489750 | - | Detail |
| CX5g039132 | 5:20,284,936-20,287,162 | - | C1H5g30374 | C2H5g05322 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| CX5g038078 | 5:20,288,531-20,292,209 | - | C1H5g17926 | C2H5g07453 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| CX5g037785 | 5:20,293,212-20,295,191 | - | C1H5g27285 | C2H5g20839 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| CX5g039362 | 5:20,295,508-20,297,068 | + | C1H5g14042 | C2H5g02383 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| CX5g038500 | 5:20,298,318-20,303,916 | + | C1H5g00258 | C2H5g16191 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| CX5g037621 | 5:20,307,268-20,308,323 | - | C1H5g17707 | C2H5g27761 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| CX5g039490 | 5:20,316,972-20,319,000 | - | C1H5g17579 | C2H5g07017 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| CX5g040508 | 5:20,319,689-20,319,991 | + | - | - | - | - | - | Detail |
| CX5g038163 | 5:20,320,542-20,323,098 | - | C1H5g17579 | C2H5g07017 | LOC_Os05g41160 | Os05g0490500 | - | Detail |