| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g14599 | 11:20,631,940-20,636,580 | - | C2H11g21619 | CX11g013528 | LOC_Os11g39540 | Os11g0609600 | GF14h | Detail |
| C1H11g11178 | 11:20,649,588-20,651,599 | + | - | CX11g011753 | LOC_Os11g36880 | - | - | Detail |
| C1H11g21404 | 11:20,656,682-20,660,312 | + | - | - | LOC_Os11g39350 | Os11g0606600 | - | Detail |
| C1H11g16722 | 11:20,658,006-20,661,455 | - | C2H11g12549 | CX11g011621 | LOC_Os11g39320 | Os11g0606500 | - | Detail |
| C1H11g17561 | 11:20,662,578-20,667,153 | + | C2H11g26115 | CX11g012714 | LOC_Os11g39330 | Os11g0606800 | - | Detail |
| C1H11g23994 | 11:20,671,849-20,674,926 | + | C2H11g01031 | CX11g013707 | LOC_Os11g39640 | Os11g0610600 | - | Detail |
| C1H11g12065 | 11:20,677,760-20,681,999 | - | C2H11g19312 | CX11g012698 | LOC_Os11g39650 | Os11g0610700 | - | Detail |
| C1H11g00768 | 11:20,686,579-20,687,259 | + | C2H11g07690 | - | LOC_Os11g39670 | Os11g0610900 | - | Detail |
| C1H11g15748 | 11:20,687,845-20,690,193 | + | C2H11g07690 | CX11g013027 | LOC_Os11g39670 | Os11g0610900 | - | Detail |
| C1H11g26927 | 11:20,748,291-20,748,546 | + | - | - | - | - | - | Detail |
| C1H11g23382 | 11:20,749,632-20,752,649 | + | C2H11g02930 | CX11g011195 | LOC_Os11g39810 | - | - | Detail |
| C1H11g06927 | 11:20,821,133-20,825,744 | + | C2H11g08472 | CX11g011985 | LOC_Os11g39990 | Os11g0614400 | - | Detail |
| C1H11g02912 | 11:20,829,452-20,837,816 | + | C2H11g13443 | CX11g011994 | LOC_Os11g39990 | Os11g0614400 | - | Detail |
| C1H11g27967 | 11:20,843,014-20,844,021 | + | C2H11g28230 | CX11g011698 | LOC_Os11g40030 | Os11g0614800 | Orysa;KRP3 | Detail |
| C1H11g17907 | 11:20,852,406-20,855,316 | + | C2H11g25142 | CX11g015016 | LOC_Os11g40070 | Os11g0614900 | - | Detail |
| C1H11g26784 | 11:20,861,662-20,868,625 | + | C2H11g13572 | CX11g010899 | LOC_Os11g40080 | Os11g0615000 | OsPAH2 | Detail |
| C1H11g22695 | 11:20,869,324-20,872,738 | + | C2H11g10529 | CX11g012704 | LOC_Os11g40090 | Os11g0615100 | - | Detail |
| C1H11g02495 | 11:20,873,261-20,876,626 | - | C2H11g25439 | CX11g012416 | LOC_Os11g40100 | Os11g0615200 | - | Detail |
| C1H11g04908 | 11:20,882,228-20,883,502 | + | C2H11g10255 | CX11g014404 | - | Os11g0484400 | - | Detail |
| C1H11g08211 | 11:20,887,216-20,888,926 | - | - | CX11g011344 | LOC_Os11g40110 | Os11g0615300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039977 | 5:20,231,347-20,231,574 | - | - | - | - | - | - | Detail |
| CX5g038773 | 5:20,235,278-20,235,994 | + | C1H5g03150 | C2H5g28435 | LOC_Os05g40950 | Os05g0488500 | - | Detail |
| CX5g037471 | 5:20,237,185-20,239,217 | - | C1H5g10864 | C2H5g15684 | LOC_Os05g40960 | Os05g0488600 | - | Detail |
| CX5g036864 | 5:20,245,953-20,246,924 | - | C1H5g29301 | C2H5g10762 | LOC_Os05g40980 | Os05g0488800 | OsSIRP1, SIRP1 | Detail |
| CX5g038499 | 5:20,249,454-20,252,049 | + | C1H5g30435 | C2H5g22368 | LOC_Os05g40990 | Os05g0488900 | - | Detail |
| CX5g038470 | 5:20,255,764-20,260,075 | + | C1H5g00494 | C2H5g07104 | LOC_Os05g41000 | Os05g0489000 | - | Detail |
| CX5g040097 | 5:20,263,123-20,265,333 | + | C1H5g12778 | C2H5g00595 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| CX5g037795 | 5:20,269,498-20,269,914 | - | C1H5g05615 | C2H5g15924 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| CX5g037436 | 5:20,273,734-20,275,915 | - | C1H5g29364 | C2H5g27372 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| CX5g037252 | 5:20,279,882-20,282,254 | + | C1H5g11382 | C2H5g09500 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| CX5g039059 | 5:20,283,914-20,284,180 | + | C1H5g00326 | C2H5g01943 | - | Os05g0489750 | - | Detail |
| CX5g039132 | 5:20,284,936-20,287,162 | - | C1H5g30374 | C2H5g05322 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| CX5g038078 | 5:20,288,531-20,292,209 | - | C1H5g17926 | C2H5g07453 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| CX5g037785 | 5:20,293,212-20,295,191 | - | C1H5g27285 | C2H5g20839 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| CX5g039362 | 5:20,295,508-20,297,068 | + | C1H5g14042 | C2H5g02383 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| CX5g038500 | 5:20,298,318-20,303,916 | + | C1H5g00258 | C2H5g16191 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| CX5g037621 | 5:20,307,268-20,308,323 | - | C1H5g17707 | C2H5g27761 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| CX5g039490 | 5:20,316,972-20,319,000 | - | C1H5g17579 | C2H5g07017 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| CX5g040508 | 5:20,319,689-20,319,991 | + | - | - | - | - | - | Detail |
| CX5g038163 | 5:20,320,542-20,323,098 | - | C1H5g17579 | C2H5g07017 | LOC_Os05g41160 | Os05g0490500 | - | Detail |