| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20602 | 1:33,825,406-33,829,243 | - | C1H1g06784 | CX1g002810 | LOC_Os01g65940 | Os01g0881966 | - | Detail |
| C2H1g14820 | 1:33,829,342-33,829,683 | - | - | - | - | - | - | Detail |
| C2H1g18577 | 1:33,831,291-33,831,649 | + | C1H1g26227 | CX1g002714 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| C2H1g05908 | 1:33,835,359-33,841,512 | + | C1H1g03465 | CX1g004350 | LOC_Os01g65986 | Os01g0882300 | - | Detail |
| C2H1g09811 | 1:33,841,734-33,842,687 | - | C1H1g00623 | CX1g004839 | LOC_Os01g66000 | Os01g0882500 | - | Detail |
| C2H1g26075 | 1:33,844,719-33,847,776 | - | C1H1g12565 | CX1g001863 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| C2H1g11503 | 1:33,854,099-33,856,181 | - | C1H1g27902 | CX1g000214 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| C2H1g08965 | 1:33,858,404-33,865,168 | + | C1H1g29165 | CX1g004776 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| C2H1g18953 | 1:33,898,433-33,901,519 | + | C1H1g04579 | CX1g004921 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| C2H1g12762 | 1:33,902,414-33,907,948 | - | C1H1g11499 | CX1g004480 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| C2H1g26289 | 1:33,916,327-33,918,090 | - | C1H1g00819 | CX1g006945 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| C2H1g15992 | 1:33,927,325-33,931,236 | + | C1H1g22008 | CX1g000207 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| C2H1g16552 | 1:33,931,364-33,942,765 | - | C1H1g14405 | CX1g001201 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| C2H1g27234 | 1:33,944,159-33,947,234 | - | C1H1g17014 | CX1g001119 | - | - | - | Detail |
| C2H1g20664 | 1:33,951,528-33,953,587 | - | C1H1g08290 | CX1g001844 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| C2H1g19237 | 1:33,955,455-33,957,011 | + | C1H1g07105 | CX1g005283 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| C2H1g27259 | 1:33,957,249-33,960,272 | - | C1H1g15937 | CX1g006373 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| C2H1g17695 | 1:33,961,162-33,963,507 | + | C1H1g27873 | CX1g005687 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| C2H1g03917 | 1:33,970,832-33,976,494 | - | C1H1g19782 | CX1g002733 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| C2H1g15479 | 1:33,981,535-33,987,010 | - | C1H1g04510 | CX1g006568 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038624 | 5:19,997,558-19,998,193 | + | C1H5g11883 | C2H5g02533 | LOC_Os05g40400 | Os05g0482501 | - | Detail |
| CX5g040561 | 5:20,006,979-20,010,595 | + | C1H5g01703 | C2H5g19376 | LOC_Os05g40410 | Os05g0482600 | - | Detail |
| CX5g037367 | 5:20,011,859-20,015,412 | - | C1H5g12944 | C2H5g12661 | LOC_Os05g40420 | Os05g0482700 | - | Detail |
| CX5g039418 | 5:20,089,141-20,089,836 | - | C1H5g04267 | C2H5g19500 | LOC_Os05g40630 | Os05g0484800 | - | Detail |
| CX5g036684 | 5:20,100,242-20,102,975 | - | C1H5g28621 | C2H5g29609 | LOC_Os05g40650 | Os05g0485000 | - | Detail |
| CX5g040127 | 5:20,104,281-20,108,161 | + | C1H5g20371 | C2H5g13383 | LOC_Os05g40700 | Os05g0485300 | - | Detail |
| CX5g040290 | 5:20,110,378-20,111,877 | + | C1H5g01527 | C2H5g03405 | LOC_Os05g40710 | Os05g0485400 | - | Detail |
| CX5g037319 | 5:20,113,188-20,117,308 | - | C1H5g12798 | C2H5g25060 | LOC_Os05g40720 | Os05g0485500 | - | Detail |
| CX5g037058 | 5:20,117,852-20,119,237 | + | C1H5g09644 | C2H5g23682 | LOC_Os05g40730 | Os05g0500300 | - | Detail |
| CX5g040391 | 5:20,121,045-20,121,245 | - | - | - | - | - | - | Detail |
| CX5g039326 | 5:20,123,090-20,125,273 | - | C1H5g20204 | C2H5g20005 | LOC_Os05g40740 | Os05g0485800 | - | Detail |
| CX5g040801 | 5:20,136,579-20,142,272 | - | C1H5g25266 | C2H5g22327 | LOC_Os05g40770 | Os05g0486100 | - | Detail |
| CX5g040354 | 5:20,145,063-20,147,279 | - | C1H5g06940 | C2H5g05566 | LOC_Os05g40780 | Os05g0486200 | - | Detail |
| CX5g040282 | 5:20,153,441-20,160,209 | + | C1H5g23574 | C2H5g24759 | LOC_Os05g40790 | Os05g0486300 | - | Detail |
| CX5g041035 | 5:20,163,910-20,165,162 | - | - | C2H5g08054 | - | Os05g0429100 | - | Detail |
| CX5g037737 | 5:20,183,925-20,190,464 | - | C1H5g05720 | C2H5g21082 | LOC_Os05g40800 | Os05g0109400 | - | Detail |
| CX5g040679 | 5:20,191,611-20,197,766 | - | C1H5g03176 | C2H5g03168 | LOC_Os05g40810 | Os05g0486600 | - | Detail |
| CX5g040595 | 5:20,200,064-20,201,535 | - | C1H5g07809 | C2H5g22924 | LOC_Os05g40820 | Os05g0486700 | - | Detail |
| CX5g039413 | 5:20,220,519-20,221,384 | + | C1H5g30282 | C2H5g01005 | LOC_Os05g40850 | Os05g0487100 | OsCG5 | Detail |
| CX5g039526 | 5:20,226,484-20,227,077 | + | C1H5g29314 | C2H5g08697 | LOC_Os05g40890 | Os05g0487300 | - | Detail |