| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01891 | 1:28,804,103-28,805,391 | - | C1H1g00876 | CX1g003833 | LOC_Os01g56070 | Os01g0766200 | - | Detail |
| C2H1g17996 | 1:28,807,817-28,808,548 | + | C1H1g18862 | CX1g000494 | LOC_Os12g07170 | Os01g0872900 | - | Detail |
| C2H1g14203 | 1:28,810,030-28,811,934 | - | C1H1g13664 | CX1g004570 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| C2H1g09451 | 1:28,823,578-28,824,686 | + | C1H1g10462 | CX1g000212 | LOC_Os01g56090 | Os01g0766400 | - | Detail |
| C2H1g11262 | 1:28,829,620-28,833,903 | + | C1H1g05983 | CX1g004309 | LOC_Os01g56100 | Os01g0766600 | - | Detail |
| C2H1g27726 | 1:28,853,152-28,856,797 | - | C1H1g11621 | CX1g002848 | LOC_Os01g56130 | Os01g0766900 | OsCSLC1 | Detail |
| C2H1g25186 | 1:28,862,323-28,867,547 | - | C1H1g23773 | CX1g006079 | LOC_Os01g56140 | Os01g0767000 | OsNMCP1 | Detail |
| C2H1g12650 | 1:28,869,195-28,872,753 | - | C1H1g07882 | CX1g002490 | LOC_Os01g56150 | Os01g0767100 | - | Detail |
| C2H1g17994 | 1:28,879,596-28,882,208 | + | C1H1g20009 | CX1g005086 | LOC_Os01g56180 | Os01g0767600 | - | Detail |
| C2H1g02356 | 1:28,882,754-28,892,859 | + | C1H1g00590 | CX1g007067 | LOC_Os01g56190 | Os01g0767700 | - | Detail |
| C2H1g28755 | 1:28,899,247-28,902,370 | + | C1H1g02614 | CX1g005068 | LOC_Os01g56200 | Os01g0767900 | - | Detail |
| C2H1g28135 | 1:28,903,763-28,904,524 | - | C1H1g10000 | CX1g005201 | LOC_Os01g56220 | Os01g0768100 | - | Detail |
| C2H1g25364 | 1:28,905,795-28,906,043 | + | - | - | - | - | - | Detail |
| C2H1g22289 | 1:28,906,228-28,906,515 | + | C1H1g16919 | CX1g002369 | - | - | - | Detail |
| C2H1g30374 | 1:28,907,288-28,910,805 | - | C1H1g17993 | CX1g001137 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| C2H1g26550 | 1:28,913,363-28,915,373 | - | C1H1g11693 | CX1g002315 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| C2H1g30140 | 1:28,917,092-28,917,463 | + | C1H1g01409 | CX1g002605 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| C2H1g24802 | 1:28,929,582-28,935,150 | + | C1H1g26530 | CX1g000267 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| C2H1g13364 | 1:28,936,882-28,943,015 | + | C1H1g09383 | CX1g006707 | LOC_Os01g43980 | - | - | Detail |
| C2H1g11170 | 1:28,949,464-28,956,140 | + | C1H1g30094 | CX1g001998 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040657 | 5:19,845,131-19,846,239 | - | C1H5g04289 | C2H5g10573 | LOC_Os05g40170 | Os05g0479900 | - | Detail |
| CX5g038549 | 5:19,847,901-19,850,619 | + | C1H5g15872 | C2H5g25386 | LOC_Os05g40180 | Os05g0480000 | - | Detail |
| CX5g040025 | 5:19,851,053-19,853,095 | - | C1H5g28899 | C2H5g29302 | LOC_Os05g40190 | Os05g0480200 | - | Detail |
| CX5g039013 | 5:19,857,308-19,859,940 | - | C1H5g23691 | C2H5g01124 | LOC_Os05g40200 | Os05g0480400 | - | Detail |
| CX5g037523 | 5:19,873,300-19,876,807 | - | C1H5g19892 | C2H5g07858 | LOC_Os05g40220 | Os05g0480600 | - | Detail |
| CX5g039503 | 5:19,881,675-19,881,860 | + | - | - | - | - | - | Detail |
| CX5g037415 | 5:19,882,432-19,884,032 | + | C1H5g06303 | C2H5g15641 | LOC_Os05g40230 | Os05g0480700 | - | Detail |
| CX5g039945 | 5:19,886,327-19,887,888 | + | C1H5g11255 | C2H5g14285 | LOC_Os05g40240 | Os05g0480800 | - | Detail |
| CX5g037094 | 5:19,892,568-19,894,017 | + | C1H5g11255 | C2H5g19268 | LOC_Os05g40250 | Os05g0480800 | - | Detail |
| CX5g037040 | 5:19,895,239-19,898,197 | + | C1H5g24027 | C2H5g11353 | LOC_Os05g40260 | Os05g0481000 | - | Detail |
| CX5g040564 | 5:19,899,047-19,899,331 | + | - | - | - | - | - | Detail |
| CX5g038324 | 5:19,907,044-19,915,082 | + | C1H5g02182 | C2H5g07339 | LOC_Os05g40270 | Os05g0481100 | - | Detail |
| CX5g039343 | 5:19,915,612-19,919,571 | - | C1H5g03756 | C2H5g09907 | LOC_Os05g40280 | Os05g0481400 | - | Detail |
| CX5g038848 | 5:19,931,338-19,935,119 | - | C1H5g03902 | C2H5g20428 | LOC_Os05g40290 | Os05g0481500 | - | Detail |
| CX5g036753 | 5:19,948,969-19,949,287 | + | C1H5g10469 | C2H5g27797 | LOC_Os05g40300 | Os05g0481600 | - | Detail |
| CX5g037459 | 5:19,952,018-19,954,728 | - | C1H5g24805 | C2H5g06900 | LOC_Os05g40310 | Os05g0481700 | - | Detail |
| CX5g038701 | 5:19,956,917-19,958,477 | + | C1H5g08499 | C2H5g25296 | LOC_Os05g40320 | Os05g0481800 | - | Detail |
| CX5g037406 | 5:19,962,004-19,964,310 | - | C1H5g14646 | C2H5g16978 | LOC_Os05g40330 | Os05g0481900 | - | Detail |
| CX5g040861 | 5:19,967,047-19,967,918 | - | C1H5g20454 | C2H5g15740 | LOC_Os05g40360 | - | - | Detail |
| CX5g037663 | 5:19,987,986-19,996,622 | + | C1H5g08150 | C2H5g03648 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |