| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18264 | 2:22,785,429-22,788,083 | + | C2H2g20688 | CX2g024892 | LOC_Os02g40130 | Os02g0614966 | - | Detail |
| C1H2g30063 | 2:22,792,176-22,795,547 | + | C2H2g24104 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C1H2g00311 | 2:22,809,258-22,809,955 | + | C2H10g03172 | - | - | - | - | Detail |
| C1H2g05371 | 2:22,812,589-22,816,778 | + | C2H2g27798 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C1H2g28443 | 2:22,851,233-22,853,939 | - | - | - | - | - | - | Detail |
| C1H2g02395 | 2:22,891,925-22,893,245 | - | C2H2g08455 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C1H2g19871 | 2:22,905,314-22,911,195 | - | C2H2g09185 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C1H2g09487 | 2:22,917,792-22,922,311 | - | C2H2g01683 | - | LOC_Os02g40420 | - | - | Detail |
| C1H2g18153 | 2:22,923,517-22,936,773 | - | C2H2g12073 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C1H2g29661 | 2:22,948,386-22,949,915 | + | C2H2g17921 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C1H2g22026 | 2:22,950,572-22,959,121 | + | C2H2g21511 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C1H2g23006 | 2:22,959,190-22,962,842 | - | C2H2g09254 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| C1H2g02429 | 2:22,963,406-22,971,975 | - | C2H2g18815 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C1H2g02028 | 2:22,988,335-22,988,934 | - | - | - | LOC_Os02g53020 | - | - | Detail |
| C1H2g22582 | 2:22,992,141-22,994,350 | + | C2H2g26929 | - | LOC_Os02g40490 | - | - | Detail |
| C1H2g02238 | 2:22,998,546-23,000,240 | + | C2H2g04756 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C1H2g04978 | 2:23,001,507-23,005,434 | + | C2H2g05107 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C1H2g16546 | 2:23,005,880-23,007,215 | - | C2H2g25708 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C1H2g01139 | 2:23,012,056-23,013,639 | - | C2H2g01262 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C1H2g19268 | 2:23,028,666-23,030,167 | + | C2H2g01838 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039468 | 5:19,670,251-19,670,898 | - | C1H5g02615 | C2H5g01656 | LOC_Os05g39830 | Os05g0476000 | - | Detail |
| CX5g037045 | 5:19,677,315-19,679,852 | + | C1H5g14499 | C2H5g15885 | LOC_Os05g39840 | Os05g0476100 | - | Detail |
| CX5g039438 | 5:19,680,478-19,685,130 | + | C1H5g13949 | C2H5g26475 | LOC_Os05g39850 | Os05g0476200 | - | Detail |
| CX5g040845 | 5:19,691,095-19,694,264 | - | C1H5g07404 | C2H5g16830 | LOC_Os05g39890 | Os05g0476350 | - | Detail |
| CX5g038260 | 5:19,710,966-19,713,014 | + | C1H5g24797 | C2H5g16023 | LOC_Os05g39930 | Os05g0476700 | OsPUB2 | Detail |
| CX5g039005 | 5:19,723,274-19,724,641 | + | C1H5g11519 | C2H5g25197 | LOC_Os05g39950 | Os05g0477200 | OsOFP22 | Detail |
| CX5g038009 | 5:19,735,510-19,736,828 | - | C1H5g02202 | C2H5g14247 | LOC_Os05g39980 | Os05g0477500 | - | Detail |
| CX5g040535 | 5:19,744,641-19,745,991 | - | C1H5g30215 | C2H5g20824 | LOC_Os05g39990 | Os05g0477600 | OsEXPA4, OsEXP4 | Detail |
| CX5g040284 | 5:19,753,818-19,754,240 | + | C1H5g10767 | C2H5g15346 | LOC_Os05g40010 | Os05g0477900 | - | Detail |
| CX5g041113 | 5:19,755,633-19,756,202 | + | C1H5g07203 | C2H5g20467 | LOC_Os05g40020 | Os05g0478000 | - | Detail |
| CX5g038626 | 5:19,757,196-19,757,657 | - | - | - | LOC_Os05g40030 | - | - | Detail |
| CX5g040411 | 5:19,760,322-19,763,937 | + | C1H5g10010 | C2H5g12806 | LOC_Os05g40040 | Os05g0478200 | - | Detail |
| CX5g040846 | 5:19,767,158-19,767,367 | + | - | - | - | - | - | Detail |
| CX5g038363 | 5:19,768,710-19,771,930 | + | C1H5g00196 | C2H5g01765 | LOC_Os05g40050 | Os05g0478300 | - | Detail |
| CX5g039425 | 5:19,774,878-19,775,941 | - | C1H5g11113 | C2H5g25461 | LOC_Os05g40060 | Os05g0478400 | - | Detail |
| CX5g037318 | 5:19,781,298-19,783,885 | - | C1H5g12837 | C2H5g08495 | LOC_Os05g40070 | Os05g0478700 | - | Detail |
| CX5g037363 | 5:19,799,599-19,800,682 | - | C1H5g11113 | C2H5g25461 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| CX5g039327 | 5:19,803,314-19,803,998 | + | - | - | - | - | - | Detail |
| CX5g039649 | 5:19,811,287-19,812,711 | - | - | C2H5g27345 | LOC_Os11g13920 | Os05g0523100 | - | Detail |
| CX5g039436 | 5:19,832,406-19,837,102 | - | C1H5g06063 | C2H5g08801 | LOC_Os05g40150 | Os05g0479700 | - | Detail |