| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22839 | 4:19,950,887-19,951,792 | + | - | - | LOC_Os04g38920 | Os04g0463200 | - | Detail |
| C2H4g08523 | 4:19,953,814-19,955,643 | + | C1H4g05728 | CX4g036267 | LOC_Os04g38930 | Os04g0463300 | - | Detail |
| C2H4g23255 | 4:19,956,557-19,957,421 | - | C1H4g28377 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g07912 | 4:19,958,148-19,958,925 | - | C1H4g31445 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g28763 | 4:19,961,059-19,964,465 | - | C1H4g09561 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C2H4g00604 | 4:19,967,876-19,968,541 | - | - | - | - | - | - | Detail |
| C2H4g28177 | 4:19,968,988-19,971,300 | + | C1H4g11967 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C2H4g13162 | 4:19,972,065-19,975,302 | - | C1H4g05080 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C2H4g07932 | 4:19,980,354-19,982,657 | - | C1H4g02516 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C2H4g12038 | 4:19,988,639-19,988,998 | + | C1H4g30641 | CX4g031871 | LOC_Os04g39010 | Os04g0464100 | - | Detail |
| C2H4g13985 | 4:19,998,440-20,003,172 | - | C1H4g01794 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C2H4g00984 | 4:20,005,937-20,009,902 | - | C1H4g07451 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C2H4g04170 | 4:20,012,720-20,017,590 | + | C1H4g23214 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C2H4g17001 | 4:20,018,221-20,019,219 | + | - | CX4g036018 | LOC_Os04g39050 | Os04g0464600 | - | Detail |
| C2H4g17707 | 4:20,020,772-20,021,056 | - | C1H4g17346 | - | - | - | - | Detail |
| C2H4g26653 | 4:20,027,874-20,028,167 | - | C1H4g20578 | CX4g036034 | - | - | - | Detail |
| C2H4g00542 | 4:20,040,523-20,046,626 | - | C1H4g22118 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C2H4g07256 | 4:20,051,032-20,051,685 | - | C1H4g16307 | - | - | Os07g0567801 | - | Detail |
| C2H4g28234 | 4:20,056,175-20,058,216 | - | C1H4g29554 | CX4g032500 | LOC_Os04g39080 | Os04g0464966 | OsFbox217, Os_F0121, MOF | Detail |
| C2H4g22620 | 4:20,058,960-20,065,196 | + | C1H4g24682 | CX4g036673 | LOC_Os04g39090 | Os04g0465000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038639 | 5:19,512,269-19,514,426 | + | C1H5g09021 | C2H5g12063 | LOC_Os05g39560 | Os05g0472700 | OsZIP5 | Detail |
| CX5g039388 | 5:19,526,248-19,526,913 | - | C1H5g31249 | C2H5g11951 | LOC_Os05g39580 | Os05g0473000 | - | Detail |
| CX5g039698 | 5:19,536,426-19,537,988 | + | C1H5g23864 | C2H5g19718 | LOC_Os05g39590 | Os05g0473300 | - | Detail |
| CX5g039234 | 5:19,539,497-19,542,351 | + | C1H5g20386 | C2H5g12883 | LOC_Os05g39600 | Os05g0473401 | - | Detail |
| CX5g039479 | 5:19,543,489-19,545,468 | - | C1H5g16953 | C2H5g12671 | LOC_Os05g39610 | Os05g0473500 | - | Detail |
| CX5g039931 | 5:19,547,766-19,548,161 | - | - | - | - | - | - | Detail |
| CX5g038166 | 5:19,550,336-19,552,720 | - | C1H5g28837 | C2H5g00871 | LOC_Os05g39650 | Os05g0473900 | - | Detail |
| CX5g037616 | 5:19,560,202-19,560,864 | + | C1H5g23543 | C2H5g03115 | LOC_Os05g39670 | Os05g0474400 | OsPRA1 | Detail |
| CX5g037301 | 5:19,564,095-19,567,843 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0474500 | - | Detail |
| CX5g038614 | 5:19,568,433-19,573,260 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0388600 | - | Detail |
| CX5g040410 | 5:19,573,939-19,576,633 | + | C1H5g02428 | C2H5g05801 | LOC_Os05g39690 | Os05g0474600 | - | Detail |
| CX5g040522 | 5:19,584,882-19,585,409 | + | C1H5g20154 | C2H5g17238 | LOC_Os05g39710 | Os05g0474700 | - | Detail |
| CX5g037583 | 5:19,588,519-19,590,962 | - | C1H5g08082 | C2H5g04432 | LOC_Os05g39720 | Os05g0474800 | OsWRKY70 | Detail |
| CX5g037743 | 5:19,595,327-19,596,991 | - | C1H5g19137 | - | LOC_Os05g39730 | Os05g0474900 | - | Detail |
| CX5g038474 | 5:19,615,967-19,617,118 | - | - | C2H5g15153 | - | - | - | Detail |
| CX5g038464 | 5:19,627,080-19,631,169 | + | C1H5g14545 | C2H5g15236 | LOC_Os05g39760 | Os05g0475300 | - | Detail |
| CX5g040082 | 5:19,631,784-19,635,280 | - | C1H5g05842 | C2H5g29956 | LOC_Os05g39770 | Os05g0475400 | Osh36, OsAMTR1, AMTR1 | Detail |
| CX5g040426 | 5:19,648,249-19,650,153 | + | C1H5g24087 | C2H5g14259 | LOC_Os05g39800 | Os05g0475700 | - | Detail |
| CX5g037092 | 5:19,659,238-19,659,690 | + | C1H10g22259 | C2H2g06010 | - | - | - | Detail |
| CX5g040377 | 5:19,660,085-19,660,450 | + | C1H5g18692 | - | - | - | - | Detail |