| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g20746 | 4:22,729,779-22,730,441 | - | C2H4g23320 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C1H4g23550 | 4:22,748,829-22,751,862 | + | C2H4g07715 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C1H4g25974 | 4:22,753,275-22,753,924 | + | C2H4g09820 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C1H4g18322 | 4:22,754,033-22,758,861 | - | C2H4g17435 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C1H4g27685 | 4:22,765,846-22,768,184 | - | C2H4g30482 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C1H4g26193 | 4:22,769,718-22,770,356 | - | C2H4g08365 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C1H4g02749 | 4:22,779,569-22,781,998 | + | C2H4g21642 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C1H4g06045 | 4:22,783,910-22,784,748 | + | C2H4g21642 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C1H4g20304 | 4:22,814,243-22,815,036 | + | C2H4g21424 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C1H4g10194 | 4:22,819,581-22,821,969 | + | C2H4g00588 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C1H4g06080 | 4:22,823,502-22,827,603 | - | C2H4g16476 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| C1H4g31583 | 4:22,830,776-22,835,825 | + | C2H4g24580 | CX4g031624 | LOC_Os04g44320 | Os04g0524600 | - | Detail |
| C1H4g03289 | 4:22,838,767-22,841,732 | + | C2H4g13558 | CX4g035938 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| C1H4g04192 | 4:22,842,384-22,842,785 | - | C2H4g06209 | CX4g032796 | - | Os04g0524950 | - | Detail |
| C1H4g13077 | 4:22,843,251-22,845,077 | - | C2H4g24635 | CX4g036453 | LOC_Os04g44340 | Os04g0525000 | - | Detail |
| C1H4g11662 | 4:22,845,800-22,852,759 | - | C2H4g03449 | CX4g034629 | LOC_Os04g44354 | Os04g0525100 | - | Detail |
| C1H4g29555 | 4:22,861,129-22,866,307 | - | C2H4g02519 | CX4g035890 | LOC_Os04g44410 | Os04g0525700 | - | Detail |
| C1H4g21652 | 4:22,873,434-22,881,820 | + | C2H4g01154 | CX4g035136 | LOC_Os04g44430 | Os04g0525900 | - | Detail |
| C1H4g10699 | 4:22,889,186-22,893,128 | + | C2H4g30395 | CX4g035210 | - | Os04g0526200 | - | Detail |
| C1H4g09431 | 4:22,903,840-22,904,770 | - | C2H4g08104 | CX4g035727 | LOC_Os04g44500 | Os04g0526800 | OsABAR1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038639 | 5:19,512,269-19,514,426 | + | C1H5g09021 | C2H5g12063 | LOC_Os05g39560 | Os05g0472700 | OsZIP5 | Detail |
| CX5g039388 | 5:19,526,248-19,526,913 | - | C1H5g31249 | C2H5g11951 | LOC_Os05g39580 | Os05g0473000 | - | Detail |
| CX5g039698 | 5:19,536,426-19,537,988 | + | C1H5g23864 | C2H5g19718 | LOC_Os05g39590 | Os05g0473300 | - | Detail |
| CX5g039234 | 5:19,539,497-19,542,351 | + | C1H5g20386 | C2H5g12883 | LOC_Os05g39600 | Os05g0473401 | - | Detail |
| CX5g039479 | 5:19,543,489-19,545,468 | - | C1H5g16953 | C2H5g12671 | LOC_Os05g39610 | Os05g0473500 | - | Detail |
| CX5g039931 | 5:19,547,766-19,548,161 | - | - | - | - | - | - | Detail |
| CX5g038166 | 5:19,550,336-19,552,720 | - | C1H5g28837 | C2H5g00871 | LOC_Os05g39650 | Os05g0473900 | - | Detail |
| CX5g037616 | 5:19,560,202-19,560,864 | + | C1H5g23543 | C2H5g03115 | LOC_Os05g39670 | Os05g0474400 | OsPRA1 | Detail |
| CX5g037301 | 5:19,564,095-19,567,843 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0474500 | - | Detail |
| CX5g038614 | 5:19,568,433-19,573,260 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0388600 | - | Detail |
| CX5g040410 | 5:19,573,939-19,576,633 | + | C1H5g02428 | C2H5g05801 | LOC_Os05g39690 | Os05g0474600 | - | Detail |
| CX5g040522 | 5:19,584,882-19,585,409 | + | C1H5g20154 | C2H5g17238 | LOC_Os05g39710 | Os05g0474700 | - | Detail |
| CX5g037583 | 5:19,588,519-19,590,962 | - | C1H5g08082 | C2H5g04432 | LOC_Os05g39720 | Os05g0474800 | OsWRKY70 | Detail |
| CX5g037743 | 5:19,595,327-19,596,991 | - | C1H5g19137 | - | LOC_Os05g39730 | Os05g0474900 | - | Detail |
| CX5g038474 | 5:19,615,967-19,617,118 | - | - | C2H5g15153 | - | - | - | Detail |
| CX5g038464 | 5:19,627,080-19,631,169 | + | C1H5g14545 | C2H5g15236 | LOC_Os05g39760 | Os05g0475300 | - | Detail |
| CX5g040082 | 5:19,631,784-19,635,280 | - | C1H5g05842 | C2H5g29956 | LOC_Os05g39770 | Os05g0475400 | Osh36, OsAMTR1, AMTR1 | Detail |
| CX5g040426 | 5:19,648,249-19,650,153 | + | C1H5g24087 | C2H5g14259 | LOC_Os05g39800 | Os05g0475700 | - | Detail |
| CX5g037092 | 5:19,659,238-19,659,690 | + | C1H10g22259 | C2H2g06010 | - | - | - | Detail |
| CX5g040377 | 5:19,660,085-19,660,450 | + | C1H5g18692 | - | - | - | - | Detail |