| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28705 | 9:14,082,386-14,085,112 | - | C2H9g16247 | CX9g055538 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| C1H9g16360 | 9:14,099,302-14,100,577 | - | C2H9g04822 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C1H9g13470 | 9:14,117,924-14,118,634 | + | C2H9g27532 | CX9g056428 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| C1H9g14260 | 9:14,127,883-14,129,418 | + | - | CX9g054921 | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| C1H9g26526 | 9:14,132,653-14,133,615 | - | C2H9g21518 | CX9g055449 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| C1H9g30982 | 9:14,135,762-14,136,721 | - | C2H9g21518 | CX9g055140 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| C1H9g04635 | 9:14,144,033-14,149,540 | + | C2H9g30062 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C1H9g15793 | 9:14,151,855-14,155,854 | + | C2H9g07506 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C1H9g14428 | 9:14,163,321-14,164,511 | - | C2H8g02869 | CX9g057237 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| C1H9g07328 | 9:14,175,436-14,180,412 | + | C2H9g21988 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C1H9g05942 | 9:14,189,906-14,193,435 | - | C2H9g18507 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C1H9g07321 | 9:14,215,317-14,217,269 | + | C2H9g27523 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C1H9g27020 | 9:14,224,376-14,226,672 | + | C2H9g05118 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C1H9g14254 | 9:14,232,038-14,234,114 | + | C2H9g05118 | CX9g055637 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g19292 | 9:14,236,876-14,238,403 | + | C2H9g27891 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g18282 | 9:14,239,677-14,240,501 | + | C2H9g20787 | CX9g056987 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |
| C1H9g17506 | 9:14,243,495-14,245,972 | + | C2H9g22499 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C1H9g21504 | 9:14,249,901-14,251,636 | - | C2H9g09485 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| C1H9g04223 | 9:14,253,097-14,255,854 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28470 | Os09g0458300 | - | Detail |
| C1H9g14790 | 9:14,256,571-14,259,265 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038639 | 5:19,512,269-19,514,426 | + | C1H5g09021 | C2H5g12063 | LOC_Os05g39560 | Os05g0472700 | OsZIP5 | Detail |
| CX5g039388 | 5:19,526,248-19,526,913 | - | C1H5g31249 | C2H5g11951 | LOC_Os05g39580 | Os05g0473000 | - | Detail |
| CX5g039698 | 5:19,536,426-19,537,988 | + | C1H5g23864 | C2H5g19718 | LOC_Os05g39590 | Os05g0473300 | - | Detail |
| CX5g039234 | 5:19,539,497-19,542,351 | + | C1H5g20386 | C2H5g12883 | LOC_Os05g39600 | Os05g0473401 | - | Detail |
| CX5g039479 | 5:19,543,489-19,545,468 | - | C1H5g16953 | C2H5g12671 | LOC_Os05g39610 | Os05g0473500 | - | Detail |
| CX5g039931 | 5:19,547,766-19,548,161 | - | - | - | - | - | - | Detail |
| CX5g038166 | 5:19,550,336-19,552,720 | - | C1H5g28837 | C2H5g00871 | LOC_Os05g39650 | Os05g0473900 | - | Detail |
| CX5g037616 | 5:19,560,202-19,560,864 | + | C1H5g23543 | C2H5g03115 | LOC_Os05g39670 | Os05g0474400 | OsPRA1 | Detail |
| CX5g037301 | 5:19,564,095-19,567,843 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0474500 | - | Detail |
| CX5g038614 | 5:19,568,433-19,573,260 | + | C1H5g05941 | C2H5g16559 | LOC_Os05g39680 | Os05g0388600 | - | Detail |
| CX5g040410 | 5:19,573,939-19,576,633 | + | C1H5g02428 | C2H5g05801 | LOC_Os05g39690 | Os05g0474600 | - | Detail |
| CX5g040522 | 5:19,584,882-19,585,409 | + | C1H5g20154 | C2H5g17238 | LOC_Os05g39710 | Os05g0474700 | - | Detail |
| CX5g037583 | 5:19,588,519-19,590,962 | - | C1H5g08082 | C2H5g04432 | LOC_Os05g39720 | Os05g0474800 | OsWRKY70 | Detail |
| CX5g037743 | 5:19,595,327-19,596,991 | - | C1H5g19137 | - | LOC_Os05g39730 | Os05g0474900 | - | Detail |
| CX5g038474 | 5:19,615,967-19,617,118 | - | - | C2H5g15153 | - | - | - | Detail |
| CX5g038464 | 5:19,627,080-19,631,169 | + | C1H5g14545 | C2H5g15236 | LOC_Os05g39760 | Os05g0475300 | - | Detail |
| CX5g040082 | 5:19,631,784-19,635,280 | - | C1H5g05842 | C2H5g29956 | LOC_Os05g39770 | Os05g0475400 | Osh36, OsAMTR1, AMTR1 | Detail |
| CX5g040426 | 5:19,648,249-19,650,153 | + | C1H5g24087 | C2H5g14259 | LOC_Os05g39800 | Os05g0475700 | - | Detail |
| CX5g037092 | 5:19,659,238-19,659,690 | + | C1H10g22259 | C2H2g06010 | - | - | - | Detail |
| CX5g040377 | 5:19,660,085-19,660,450 | + | C1H5g18692 | - | - | - | - | Detail |