| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g30176 | 5:17,978,195-17,981,429 | - | C1H5g21927 | CX5g041041 | LOC_Os05g36050 | Os05g0436100 | - | Detail |
| C2H5g25140 | 5:17,989,571-17,996,570 | + | - | - | - | - | - | Detail |
| C2H5g24518 | 5:18,002,396-18,006,364 | + | C1H5g00945 | CX5g038521 | LOC_Os05g36090 | Os05g0436900 | - | Detail |
| C2H5g25424 | 5:18,017,653-18,018,589 | + | C1H5g20450 | - | LOC_Os05g36100 | Os05g0437050 | - | Detail |
| C2H5g23889 | 5:18,021,296-18,023,014 | + | C1H5g30900 | CX5g038881 | LOC_Os05g36100 | Os05g0437100 | - | Detail |
| C2H5g26705 | 5:18,024,751-18,028,715 | + | C1H5g13619 | CX5g040437 | LOC_Os05g36110 | Os05g0437200 | - | Detail |
| C2H5g01872 | 5:18,029,322-18,034,987 | - | C1H5g30746 | CX5g038248 | LOC_Os05g36120 | Os05g0437300 | OsPTB2 | Detail |
| C2H5g07160 | 5:18,039,217-18,039,669 | - | C1H5g30728 | CX5g037089 | LOC_Os05g36140 | Os05g0437401 | - | Detail |
| C2H5g23446 | 5:18,041,448-18,044,559 | - | C1H5g12364 | CX5g040008 | LOC_Os05g36150 | Os05g0437500 | - | Detail |
| C2H5g27422 | 5:18,045,358-18,048,526 | + | C1H5g21578 | CX5g038670 | LOC_Os05g36160 | Os05g0437700 | - | Detail |
| C2H5g25843 | 5:18,057,263-18,057,484 | + | - | CX5g039734 | - | - | - | Detail |
| C2H5g29490 | 5:18,060,794-18,063,653 | - | C1H5g27479 | CX5g036909 | LOC_Os05g36190 | Os05g0437900 | - | Detail |
| C2H5g16485 | 5:18,072,664-18,074,311 | + | C1H5g31814 | CX5g037659 | LOC_Os05g36260 | Os05g0438500 | - | Detail |
| C2H5g12266 | 5:18,074,807-18,077,582 | - | C1H5g00387 | CX5g036739 | LOC_Os05g36270 | Os05g0438600 | OscFBP2 | Detail |
| C2H5g20770 | 5:18,079,894-18,081,521 | - | C1H5g01011 | CX5g040190 | LOC_Os05g36280 | Os05g0489800 | OsCENH3 | Detail |
| C2H5g27716 | 5:18,082,195-18,085,472 | - | C1H5g30330 | CX5g040511 | LOC_Os05g36290 | Os05g0438800 | - | Detail |
| C2H5g12466 | 5:18,096,477-18,097,130 | - | C1H5g26379 | CX5g038867 | LOC_Os05g36310 | Os05g0439000 | - | Detail |
| C2H5g14391 | 5:18,102,650-18,104,314 | - | C1H5g16929 | CX5g039078 | LOC_Os05g36350 | Os05g0439300 | - | Detail |
| C2H5g04868 | 5:18,110,066-18,111,424 | + | C1H5g23246 | CX5g039474 | LOC_Os05g36360 | Os05g0439400 | PUB44, OsPUB44 | Detail |
| C2H5g08231 | 5:18,114,128-18,114,526 | - | C1H5g11953 | CX5g037862 | LOC_Os05g36380 | Os05g0439750 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007037 | 1:23,056,747-23,056,920 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g007210 | 1:23,058,548-23,061,382 | + | C1H1g17843 | C2H1g27294 | LOC_Os01g45274 | Os01g0640000 | - | Detail |
| CX1g000695 | 1:23,067,598-23,069,361 | - | C1H1g22957 | C2H1g21978 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| CX1g005262 | 1:23,068,798-23,069,457 | + | - | - | - | - | - | Detail |
| CX1g002458 | 1:23,075,078-23,077,218 | + | C1H1g31055 | C2H1g08088 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| CX1g004617 | 1:23,077,875-23,079,965 | - | C1H1g10058 | C2H1g22980 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| CX1g003997 | 1:23,082,065-23,085,266 | - | C1H1g19962 | C2H1g13504 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| CX1g000116 | 1:23,086,115-23,090,204 | + | C1H1g17185 | C2H1g09207 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| CX1g004780 | 1:23,090,681-23,093,714 | + | C1H1g25061 | C2H1g17482 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| CX1g004195 | 1:23,107,494-23,110,434 | - | C1H1g31552 | C2H1g02385 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| CX1g003051 | 1:23,115,546-23,117,846 | + | C1H1g00902 | C2H1g03402 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| CX1g005344 | 1:23,119,698-23,125,755 | + | C1H1g12918 | C2H1g07647 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| CX1g001703 | 1:23,132,726-23,132,986 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002319 | 1:23,142,602-23,142,751 | - | - | - | - | - | - | Detail |
| CX1g000192 | 1:23,150,889-23,155,077 | + | C1H1g02209 | C2H1g05902 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| CX1g001242 | 1:23,156,944-23,158,522 | - | C1H1g26078 | C2H1g09079 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| CX1g003646 | 1:23,172,696-23,176,168 | + | C1H1g21876 | C2H1g05185 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| CX1g000183 | 1:23,182,158-23,182,457 | - | - | - | - | - | - | Detail |
| CX1g003628 | 1:23,187,222-23,190,280 | - | C1H1g25133 | C2H1g02636 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| CX1g005269 | 1:23,205,576-23,211,478 | - | C1H1g17824 | C2H1g17274 | LOC_Os01g45620 | Os01g0643800 | - | Detail |