| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14013 | 1:21,032,065-21,035,863 | - | C1H1g08879 | CX1g006848 | LOC_Os01g41750 | Os01g0601625 | - | Detail |
| C2H1g16059 | 1:21,078,188-21,079,384 | - | C1H1g19788 | CX1g006511 | LOC_Os01g41780 | Os01g0601700 | - | Detail |
| C2H1g29858 | 1:21,087,080-21,087,584 | - | C1H1g08927 | - | - | - | - | Detail |
| C2H1g29899 | 1:21,104,130-21,106,994 | - | C1H1g16376 | CX1g006511 | LOC_Os01g41770 | Os01g0601675 | - | Detail |
| C2H1g02945 | 1:21,137,243-21,139,838 | - | C1H1g19788 | CX1g002379 | LOC_Os01g41770 | Os01g0809300 | LRR1, OsLRR1 | Detail |
| C2H1g19450 | 1:21,188,436-21,191,542 | - | C1H1g30244 | CX1g005051 | LOC_Os01g41800 | Os01g0602200 | CYP72A31 | Detail |
| C2H1g05141 | 1:21,217,243-21,219,905 | - | C1H1g22213 | CX1g005419 | LOC_Os01g41810 | Os01g0602400 | - | Detail |
| C2H1g30376 | 1:21,226,059-21,229,115 | - | C1H1g22360 | CX1g003299 | LOC_Os01g41820 | Os01g0602500 | - | Detail |
| C2H1g19557 | 1:21,231,750-21,232,763 | - | C1H1g05853 | CX1g000347 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| C2H1g15079 | 1:21,278,591-21,283,918 | + | C1H1g05516 | CX1g005328 | LOC_Os01g41870 | Os01g0602800 | - | Detail |
| C2H1g19193 | 1:21,292,267-21,296,197 | - | C1H1g22010 | CX1g001319 | LOC_Os01g41880 | Os01g0603000 | - | Detail |
| C2H1g25531 | 1:21,298,972-21,299,424 | + | - | - | - | - | - | Detail |
| C2H1g00117 | 1:21,312,441-21,314,461 | + | C1H1g14967 | CX1g000319 | LOC_Os01g41900 | Os01g0603300 | - | Detail |
| C2H1g12509 | 1:21,332,659-21,333,513 | - | - | - | - | - | - | Detail |
| C2H1g00948 | 1:21,347,467-21,354,759 | + | C1H1g29168 | CX1g006511 | LOC_Os01g41950 | Os01g0604150 | - | Detail |
| C2H1g07120 | 1:21,360,778-21,361,475 | - | C1H1g06943 | - | - | - | - | Detail |
| C2H1g14362 | 1:21,369,878-21,373,718 | - | C1H1g02821 | CX1g006048 | LOC_Os01g42010 | Os01g0604700 | - | Detail |
| C2H1g02941 | 1:21,385,307-21,386,946 | + | C1H1g28348 | CX1g006060 | LOC_Os01g42030 | Os01g0605100 | - | Detail |
| C2H1g14724 | 1:21,390,492-21,392,760 | + | C1H1g14962 | CX1g000014 | LOC_Os01g42040 | Os01g0605300 | - | Detail |
| C2H1g28671 | 1:21,393,220-21,396,453 | + | C1H1g16958 | CX1g000292 | LOC_Os01g42060 | Os01g0605400 | OsGEX3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007037 | 1:23,056,747-23,056,920 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g007210 | 1:23,058,548-23,061,382 | + | C1H1g17843 | C2H1g27294 | LOC_Os01g45274 | Os01g0640000 | - | Detail |
| CX1g000695 | 1:23,067,598-23,069,361 | - | C1H1g22957 | C2H1g21978 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| CX1g005262 | 1:23,068,798-23,069,457 | + | - | - | - | - | - | Detail |
| CX1g002458 | 1:23,075,078-23,077,218 | + | C1H1g31055 | C2H1g08088 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| CX1g004617 | 1:23,077,875-23,079,965 | - | C1H1g10058 | C2H1g22980 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| CX1g003997 | 1:23,082,065-23,085,266 | - | C1H1g19962 | C2H1g13504 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| CX1g000116 | 1:23,086,115-23,090,204 | + | C1H1g17185 | C2H1g09207 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| CX1g004780 | 1:23,090,681-23,093,714 | + | C1H1g25061 | C2H1g17482 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| CX1g004195 | 1:23,107,494-23,110,434 | - | C1H1g31552 | C2H1g02385 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| CX1g003051 | 1:23,115,546-23,117,846 | + | C1H1g00902 | C2H1g03402 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| CX1g005344 | 1:23,119,698-23,125,755 | + | C1H1g12918 | C2H1g07647 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| CX1g001703 | 1:23,132,726-23,132,986 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002319 | 1:23,142,602-23,142,751 | - | - | - | - | - | - | Detail |
| CX1g000192 | 1:23,150,889-23,155,077 | + | C1H1g02209 | C2H1g05902 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| CX1g001242 | 1:23,156,944-23,158,522 | - | C1H1g26078 | C2H1g09079 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| CX1g003646 | 1:23,172,696-23,176,168 | + | C1H1g21876 | C2H1g05185 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| CX1g000183 | 1:23,182,158-23,182,457 | - | - | - | - | - | - | Detail |
| CX1g003628 | 1:23,187,222-23,190,280 | - | C1H1g25133 | C2H1g02636 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| CX1g005269 | 1:23,205,576-23,211,478 | - | C1H1g17824 | C2H1g17274 | LOC_Os01g45620 | Os01g0643800 | - | Detail |