| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g25165 | 3:32,885,686-32,887,588 | - | C2H3g20263 | CX3g025448 | LOC_Os03g62490 | Os03g0841700 | - | Detail |
| C1H3g04020 | 3:32,888,463-32,894,599 | - | C2H3g22865 | CX3g031204 | LOC_Os03g62500 | Os03g0841800 | - | Detail |
| C1H3g13920 | 3:32,895,949-32,901,260 | - | C2H3g23885 | CX3g029829 | LOC_Os03g62510 | Os03g0841900 | - | Detail |
| C1H3g00003 | 3:32,917,162-32,920,136 | + | C2H3g18445 | CX3g029998 | LOC_Os03g62580 | Os03g0842700 | - | Detail |
| C1H3g05358 | 3:32,921,424-32,923,180 | - | C2H3g22112 | CX3g025495 | LOC_Os03g62590 | Os03g0842900 | OsHSD2 | Detail |
| C1H3g18020 | 3:32,925,256-32,926,614 | - | C2H3g14550 | CX3g028475 | LOC_Os03g62600 | Os03g0843100 | - | Detail |
| C1H3g24850 | 3:32,928,738-32,932,739 | + | C2H3g06127 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C1H3g01007 | 3:32,933,006-32,935,436 | - | C2H3g01988 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C1H3g21046 | 3:32,935,712-32,937,240 | + | C2H3g11755 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C1H3g08743 | 3:32,937,686-32,943,657 | - | C2H3g01237 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C1H3g28947 | 3:32,944,618-32,952,053 | + | C2H3g27702 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C1H3g22971 | 3:32,953,532-32,957,757 | + | C2H3g20877 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C1H3g08128 | 3:32,958,528-32,959,671 | + | C2H3g21220 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C1H3g30449 | 3:32,960,840-32,964,567 | - | C2H3g22425 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C1H3g17557 | 3:32,964,924-32,966,813 | + | C2H3g21394 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C1H3g06046 | 3:32,967,135-32,970,461 | + | C2H3g07789 | CX3g027520 | LOC_Os03g62910 | Os03g0846400 | - | Detail |
| C1H3g24479 | 3:32,975,508-32,981,063 | - | C2H3g22805 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C1H3g13171 | 3:32,983,327-32,986,507 | + | C2H3g19054 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C1H3g03440 | 3:32,987,871-32,992,536 | + | C2H3g29284 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C1H3g17919 | 3:32,992,851-32,995,861 | - | C2H3g07021 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g007037 | 1:23,056,747-23,056,920 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g007210 | 1:23,058,548-23,061,382 | + | C1H1g17843 | C2H1g27294 | LOC_Os01g45274 | Os01g0640000 | - | Detail |
| CX1g000695 | 1:23,067,598-23,069,361 | - | C1H1g22957 | C2H1g21978 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| CX1g005262 | 1:23,068,798-23,069,457 | + | - | - | - | - | - | Detail |
| CX1g002458 | 1:23,075,078-23,077,218 | + | C1H1g31055 | C2H1g08088 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| CX1g004617 | 1:23,077,875-23,079,965 | - | C1H1g10058 | C2H1g22980 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| CX1g003997 | 1:23,082,065-23,085,266 | - | C1H1g19962 | C2H1g13504 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| CX1g000116 | 1:23,086,115-23,090,204 | + | C1H1g17185 | C2H1g09207 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| CX1g004780 | 1:23,090,681-23,093,714 | + | C1H1g25061 | C2H1g17482 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| CX1g004195 | 1:23,107,494-23,110,434 | - | C1H1g31552 | C2H1g02385 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| CX1g003051 | 1:23,115,546-23,117,846 | + | C1H1g00902 | C2H1g03402 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| CX1g005344 | 1:23,119,698-23,125,755 | + | C1H1g12918 | C2H1g07647 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| CX1g001703 | 1:23,132,726-23,132,986 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g002319 | 1:23,142,602-23,142,751 | - | - | - | - | - | - | Detail |
| CX1g000192 | 1:23,150,889-23,155,077 | + | C1H1g02209 | C2H1g05902 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| CX1g001242 | 1:23,156,944-23,158,522 | - | C1H1g26078 | C2H1g09079 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| CX1g003646 | 1:23,172,696-23,176,168 | + | C1H1g21876 | C2H1g05185 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| CX1g000183 | 1:23,182,158-23,182,457 | - | - | - | - | - | - | Detail |
| CX1g003628 | 1:23,187,222-23,190,280 | - | C1H1g25133 | C2H1g02636 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| CX1g005269 | 1:23,205,576-23,211,478 | - | C1H1g17824 | C2H1g17274 | LOC_Os01g45620 | Os01g0643800 | - | Detail |