| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30064 | 1:4,844,359-4,848,296 | - | C2H1g25446 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C1H1g16523 | 1:4,877,117-4,878,002 | - | C2H1g03634 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C1H1g23585 | 1:4,883,309-4,883,626 | - | C2H1g24699 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g14400 | 1:4,883,733-4,884,400 | - | C2H1g28525 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C1H1g15606 | 1:4,893,738-4,902,428 | - | C2H1g12459 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C1H1g13227 | 1:4,913,013-4,914,395 | - | C2H1g19665 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C1H1g22249 | 1:4,924,675-4,932,481 | - | C2H1g09694 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C1H1g17903 | 1:4,967,422-4,968,687 | + | C2H1g26674 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C1H1g18982 | 1:4,974,967-4,975,794 | + | C2H1g25575 | - | - | Os01g0202601 | - | Detail |
| C1H1g22813 | 1:4,981,388-4,984,579 | + | C2H1g11027 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C1H1g30411 | 1:4,991,095-4,994,109 | - | C2H1g23331 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C1H1g09441 | 1:4,995,564-4,997,839 | - | C2H1g21358 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C1H1g13068 | 1:5,003,013-5,004,957 | - | C2H1g27421 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C1H1g30796 | 1:5,043,175-5,047,575 | - | C2H1g16705 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C1H1g01843 | 1:5,051,683-5,063,908 | - | C2H1g09104 | - | - | - | - | Detail |
| C1H1g24281 | 1:5,065,518-5,068,602 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g05818 | 1:5,070,855-5,074,344 | + | C2H1g00620 | - | - | - | - | Detail |
| C1H1g15430 | 1:5,079,327-5,082,999 | + | C2H1g06825 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| C1H1g01247 | 1:5,083,533-5,086,781 | - | C2H1g29778 | CX1g002344 | LOC_Os01g10800 | Os01g0205200 | - | Detail |
| C1H1g30346 | 1:5,087,144-5,088,059 | + | C2H1g24453 | CX1g004381 | LOC_Os01g10810 | Os01g0205300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038352 | 5:19,181,595-19,189,031 | - | C1H5g26692 | C2H5g05069 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| CX5g038856 | 5:19,192,087-19,199,921 | + | C1H5g04043 | C2H5g10683 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| CX5g040041 | 5:19,207,461-19,213,808 | - | C1H5g03501 | C2H5g00642 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| CX5g037441 | 5:19,225,054-19,225,296 | + | C1H5g26266 | C2H5g07866 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| CX5g037912 | 5:19,232,012-19,238,864 | - | C1H5g29457 | C2H5g20572 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| CX5g040058 | 5:19,237,875-19,238,303 | + | - | - | - | Os05g0465250 | - | Detail |
| CX5g039928 | 5:19,242,731-19,243,512 | - | C1H5g08488 | C2H5g24578 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| CX5g037984 | 5:19,248,941-19,253,396 | + | C1H5g21670 | C2H5g18626 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| CX5g037393 | 5:19,260,145-19,261,307 | - | C1H5g02280 | C2H5g30441 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| CX5g037000 | 5:19,264,623-19,267,349 | - | C1H5g22492 | C2H5g26967 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| CX5g037421 | 5:19,270,375-19,270,686 | + | C1H5g01037 | C2H5g09767 | LOC_Os05g39050 | Os05g0466600 | - | Detail |
| CX5g039804 | 5:19,271,996-19,273,414 | - | C1H5g31118 | C2H5g13581 | LOC_Os05g39060 | Os05g0126800 | - | Detail |
| CX5g039967 | 5:19,277,509-19,279,672 | + | C1H5g05117 | C2H5g06731 | LOC_Os05g39070 | Os05g0466800 | - | Detail |
| CX5g037557 | 5:19,280,543-19,284,942 | - | C1H5g14576 | C2H5g29590 | LOC_Os05g39080 | Os05g0466900 | - | Detail |
| CX5g037206 | 5:19,287,939-19,292,773 | - | C1H5g19503 | C2H5g06761 | LOC_Os05g39090 | Os05g0467000 | OsCPK16 | Detail |
| CX5g037934 | 5:19,298,446-19,298,814 | + | - | - | - | - | - | Detail |
| CX5g037381 | 5:19,299,320-19,299,544 | - | C1H4g18335 | C2H4g30292 | LOC_Os04g47990 | Os04g0567800 | OsDOF18 | Detail |
| CX5g040208 | 5:19,301,136-19,303,879 | + | C1H5g25663 | C2H5g13821 | LOC_Os05g39110 | Os05g0467300 | - | Detail |
| CX5g040026 | 5:19,310,841-19,316,313 | - | C1H5g21928 | C2H5g01596 | LOC_Os05g39140 | Os05g0467600 | - | Detail |
| CX5g036720 | 5:19,345,903-19,347,438 | - | C1H5g21975 | C2H5g02966 | LOC_Os05g39220 | Os05g0468500 | - | Detail |