| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09905 | 1:33,212,905-33,215,285 | + | C1H1g30307 | CX1g007080 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| C2H1g24941 | 1:33,215,849-33,220,736 | - | C1H1g30705 | CX1g002156 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| C2H1g06937 | 1:33,222,337-33,229,940 | - | C1H1g03661 | CX1g002156 | LOC_Os01g64900 | - | - | Detail |
| C2H1g30680 | 1:33,234,744-33,237,160 | - | C1H1g25047 | CX1g002614 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| C2H1g14315 | 1:33,238,488-33,241,101 | + | C1H1g19257 | CX1g001436 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| C2H1g12747 | 1:33,242,499-33,245,068 | + | C1H1g00245 | CX1g002829 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| C2H1g12820 | 1:33,255,690-33,260,814 | + | C1H1g27512 | CX1g001484 | LOC_Os01g64970 | Os01g0869900 | SAPK4, OsSAPK4 | Detail |
| C2H1g15095 | 1:33,261,090-33,266,609 | - | C1H1g13667 | CX1g002784 | LOC_Os01g64980 | Os01g0870100 | - | Detail |
| C2H1g23479 | 1:33,268,295-33,269,667 | - | - | - | - | - | - | Detail |
| C2H1g13430 | 1:33,269,594-33,274,107 | + | C1H1g03643 | CX1g005766 | LOC_Os01g64990 | Os01g0870201 | - | Detail |
| C2H1g08641 | 1:33,274,847-33,280,865 | + | C1H1g25940 | CX1g004934 | LOC_Os01g64990 | Os01g0870300 | OsAMT3;1 | Detail |
| C2H1g07832 | 1:33,283,118-33,285,486 | + | C1H1g14637 | CX1g001460 | LOC_Os01g65000 | Os01g0831300 | - | Detail |
| C2H1g11379 | 1:33,286,716-33,287,597 | - | C1H1g16493 | CX1g004252 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C2H1g20125 | 1:33,287,685-33,289,886 | - | C1H1g07139 | CX1g001391 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C2H1g08106 | 1:33,292,314-33,295,072 | - | C1H1g27684 | CX1g001391 | LOC_Os01g65060 | Os01g0870500 | - | Detail |
| C2H1g01248 | 1:33,299,994-33,301,349 | - | C1H1g27053 | CX1g005366 | - | Os01g0347200 | - | Detail |
| C2H1g01910 | 1:33,311,066-33,313,791 | + | C1H1g27684 | CX1g004252 | LOC_Os01g65060 | Os01g0642801 | - | Detail |
| C2H1g28915 | 1:33,315,190-33,322,033 | + | C1H1g29415 | CX1g002432 | LOC_Os01g65070 | Os01g0871100 | - | Detail |
| C2H1g00963 | 1:33,329,474-33,334,508 | + | C1H1g03641 | CX1g005777 | LOC_Os01g65090 | Os01g0871300 | - | Detail |
| C2H1g24816 | 1:33,335,144-33,336,972 | - | C1H1g20493 | CX1g000514 | LOC_Os01g65094 | Os01g0871350 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038116 | 5:19,054,073-19,054,600 | - | C1H5g08079 | C2H5g12287 | LOC_Os05g38600 | Os05g0460900 | - | Detail |
| CX5g039642 | 5:19,057,062-19,061,418 | - | C1H5g24060 | C2H5g19612 | LOC_Os05g38610 | Os05g0461000 | - | Detail |
| CX5g040414 | 5:19,063,362-19,064,036 | + | C1H5g20771 | C2H5g00940 | LOC_Os05g38620 | Os05g0461200 | - | Detail |
| CX5g037842 | 5:19,064,631-19,067,186 | - | C1H5g01830 | C2H5g14913 | LOC_Os05g38630 | Os05g0461300 | - | Detail |
| CX5g038395 | 5:19,070,313-19,070,564 | - | - | - | - | Os05g0461350 | - | Detail |
| CX5g038934 | 5:19,072,606-19,073,326 | - | C1H5g11008 | C2H5g14035 | LOC_Os05g38640 | Os05g0461400 | - | Detail |
| CX5g039712 | 5:19,081,992-19,082,279 | + | C1H5g05333 | C2H5g30394 | LOC_Os05g38660 | Os05g0461600 | - | Detail |
| CX5g037526 | 5:19,090,192-19,090,899 | - | C1H5g23888 | C2H5g00554 | LOC_Os05g38680 | Os05g0462000 | - | Detail |
| CX5g037861 | 5:19,107,101-19,108,255 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g38690 | Os05g0462200 | - | Detail |
| CX5g038414 | 5:19,114,919-19,121,251 | - | C1H5g28074 | C2H5g10261 | LOC_Os05g38710 | Os05g0462301 | - | Detail |
| CX5g037480 | 5:19,129,455-19,130,813 | + | C1H5g08937 | C2H5g13178 | LOC_Os05g38720 | Os05g0462500 | - | Detail |
| CX5g038063 | 5:19,136,090-19,136,506 | - | - | C2H5g00997 | LOC_Os01g23600 | Os01g0337700 | - | Detail |
| CX5g040696 | 5:19,138,000-19,145,831 | - | C1H5g16481 | C2H5g23688 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| CX5g040997 | 5:19,147,495-19,147,806 | - | C1H5g21036 | C2H5g22701 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| CX5g040276 | 5:19,151,548-19,151,838 | - | C1H5g10476 | C2H5g30583 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| CX5g040728 | 5:19,152,975-19,154,830 | - | C1H5g21054 | C2H5g09732 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| CX5g041103 | 5:19,161,229-19,163,606 | - | C1H5g22054 | C2H5g02393 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| CX5g038806 | 5:19,163,926-19,166,363 | + | C1H5g20773 | C2H5g25319 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| CX5g039882 | 5:19,169,055-19,173,879 | + | C1H5g12108 | C2H5g01133 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| CX5g040078 | 5:19,176,192-19,178,797 | - | C1H5g15206 | C2H5g16713 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |