| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g18535 | 12:8,599,848-8,603,542 | - | C2H12g03927 | CX12g017377 | LOC_Os12g17880 | Os12g0277000 | - | Detail |
| C1H12g24761 | 12:8,640,341-8,645,737 | - | C2H12g28494 | CX12g017705 | LOC_Os12g17900 | Os12g0277400 | - | Detail |
| C1H12g06371 | 12:8,651,726-8,656,037 | + | C2H12g12318 | CX12g016191 | LOC_Os12g17910 | Os12g0277500 | - | Detail |
| C1H12g01376 | 12:8,663,798-8,664,169 | - | C2H12g11764 | CX12g018723 | LOC_Os12g17930 | Os12g0277900 | - | Detail |
| C1H12g09603 | 12:8,675,307-8,676,306 | - | C2H12g20076 | CX12g016247 | LOC_Os12g17950 | Os12g0277900 | - | Detail |
| C1H12g04705 | 12:8,687,683-8,689,252 | - | - | - | - | - | - | Detail |
| C1H12g22417 | 12:8,717,746-8,721,032 | - | C2H12g07192 | CX12g018234 | LOC_Os12g18070 | - | - | Detail |
| C1H12g24393 | 12:8,731,397-8,742,257 | - | C2H12g14594 | CX12g016938 | LOC_Os12g18110 | Os12g0278700 | - | Detail |
| C1H12g12740 | 12:8,750,884-8,758,742 | - | C2H12g02522 | CX12g017296 | LOC_Os12g18120 | Os12g0278800 | - | Detail |
| C1H12g06841 | 12:8,773,539-8,781,544 | + | C2H12g09689 | CX12g016351 | LOC_Os12g18140 | Os12g0279000 | - | Detail |
| C1H12g22097 | 12:8,783,663-8,793,817 | - | C2H12g26090 | CX12g018140 | LOC_Os12g18150 | Os12g0279100 | - | Detail |
| C1H12g00021 | 12:8,814,222-8,822,818 | - | C2H12g22060 | CX12g017706 | LOC_Os12g18200 | Os12g0279600 | - | Detail |
| C1H12g28480 | 12:8,871,174-8,872,544 | + | C2H12g06640 | CX12g016081 | LOC_Os12g18450 | Os12g0282400 | - | Detail |
| C1H12g12461 | 12:8,880,545-8,883,944 | - | C2H12g30569 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g08537 | 12:8,887,978-8,888,964 | - | C2H12g15312 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g11746 | 12:8,903,686-8,908,295 | + | C2H12g10872 | CX12g016617 | LOC_Os12g18360 | Os12g0281300 | Pi-ta | Detail |
| C1H12g17326 | 12:8,911,635-8,911,967 | + | C2H12g17710 | CX12g016617 | LOC_Os12g18220 | Os12g0280050 | - | Detail |
| C1H12g13301 | 12:8,940,516-8,945,908 | - | C2H12g22248 | CX12g016673 | LOC_Os12g18530 | Os12g0283100 | - | Detail |
| C1H12g10664 | 12:8,954,074-8,954,466 | + | - | - | - | - | - | Detail |
| C1H12g08210 | 12:9,014,705-9,021,118 | - | C2H12g13366 | CX12g018758 | LOC_Os12g18630 | Os12g0283800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038116 | 5:19,054,073-19,054,600 | - | C1H5g08079 | C2H5g12287 | LOC_Os05g38600 | Os05g0460900 | - | Detail |
| CX5g039642 | 5:19,057,062-19,061,418 | - | C1H5g24060 | C2H5g19612 | LOC_Os05g38610 | Os05g0461000 | - | Detail |
| CX5g040414 | 5:19,063,362-19,064,036 | + | C1H5g20771 | C2H5g00940 | LOC_Os05g38620 | Os05g0461200 | - | Detail |
| CX5g037842 | 5:19,064,631-19,067,186 | - | C1H5g01830 | C2H5g14913 | LOC_Os05g38630 | Os05g0461300 | - | Detail |
| CX5g038395 | 5:19,070,313-19,070,564 | - | - | - | - | Os05g0461350 | - | Detail |
| CX5g038934 | 5:19,072,606-19,073,326 | - | C1H5g11008 | C2H5g14035 | LOC_Os05g38640 | Os05g0461400 | - | Detail |
| CX5g039712 | 5:19,081,992-19,082,279 | + | C1H5g05333 | C2H5g30394 | LOC_Os05g38660 | Os05g0461600 | - | Detail |
| CX5g037526 | 5:19,090,192-19,090,899 | - | C1H5g23888 | C2H5g00554 | LOC_Os05g38680 | Os05g0462000 | - | Detail |
| CX5g037861 | 5:19,107,101-19,108,255 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g38690 | Os05g0462200 | - | Detail |
| CX5g038414 | 5:19,114,919-19,121,251 | - | C1H5g28074 | C2H5g10261 | LOC_Os05g38710 | Os05g0462301 | - | Detail |
| CX5g037480 | 5:19,129,455-19,130,813 | + | C1H5g08937 | C2H5g13178 | LOC_Os05g38720 | Os05g0462500 | - | Detail |
| CX5g038063 | 5:19,136,090-19,136,506 | - | - | C2H5g00997 | LOC_Os01g23600 | Os01g0337700 | - | Detail |
| CX5g040696 | 5:19,138,000-19,145,831 | - | C1H5g16481 | C2H5g23688 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| CX5g040997 | 5:19,147,495-19,147,806 | - | C1H5g21036 | C2H5g22701 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| CX5g040276 | 5:19,151,548-19,151,838 | - | C1H5g10476 | C2H5g30583 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| CX5g040728 | 5:19,152,975-19,154,830 | - | C1H5g21054 | C2H5g09732 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| CX5g041103 | 5:19,161,229-19,163,606 | - | C1H5g22054 | C2H5g02393 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| CX5g038806 | 5:19,163,926-19,166,363 | + | C1H5g20773 | C2H5g25319 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| CX5g039882 | 5:19,169,055-19,173,879 | + | C1H5g12108 | C2H5g01133 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| CX5g040078 | 5:19,176,192-19,178,797 | - | C1H5g15206 | C2H5g16713 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |