| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g16224 | 11:20,157,824-20,167,331 | + | C2H11g21120 | CX11g011086 | LOC_Os11g38630 | Os11g0599000 | - | Detail |
| C1H11g31321 | 11:20,167,908-20,173,942 | + | C2H11g03079 | CX11g013653 | LOC_Os11g38640 | Os11g0599101 | - | Detail |
| C1H11g10183 | 11:20,200,575-20,205,199 | + | C2H11g26322 | CX11g012724 | LOC_Os11g38670 | Os11g0599500 | - | Detail |
| C1H11g14504 | 11:20,271,357-20,272,006 | + | C2H11g04103 | - | LOC_Os11g38790 | Os11g0600600 | - | Detail |
| C1H11g23803 | 11:20,273,447-20,278,809 | + | C2H11g01438 | CX11g015029 | LOC_Os11g38800 | Os11g0600700 | - | Detail |
| C1H11g28120 | 11:20,283,021-20,286,884 | + | C2H11g06629 | CX11g010945 | LOC_Os11g38810 | Os11g0600900 | - | Detail |
| C1H11g09463 | 11:20,322,384-20,324,611 | + | C2H11g12692 | CX11g012740 | LOC_Os11g38850 | Os11g0601500 | Gnk2RLK-9 | Detail |
| C1H11g02819 | 11:20,332,323-20,333,088 | + | C2H11g15535 | CX11g011203 | LOC_Os11g38850 | Os11g0681400 | - | Detail |
| C1H11g00779 | 11:20,338,678-20,339,367 | + | C2H11g00058 | CX11g014525 | LOC_Os11g38860 | Os11g0601600 | - | Detail |
| C1H11g14209 | 11:20,339,474-20,339,821 | + | C2H11g02079 | CX11g014525 | LOC_Os11g38860 | Os11g0601600 | - | Detail |
| C1H11g25737 | 11:20,340,485-20,343,174 | + | C2H11g16270 | CX11g014525 | LOC_Os11g38860 | Os11g0601600 | - | Detail |
| C1H11g29212 | 11:20,342,982-20,346,934 | - | C2H11g09460 | CX11g013226 | LOC_Os11g38870 | Os11g0601700 | OsbHLH061 | Detail |
| C1H11g14977 | 11:20,358,812-20,361,253 | + | C2H11g29485 | CX11g014411 | LOC_Os11g38900 | Os11g0602200 | - | Detail |
| C1H11g14143 | 11:20,370,487-20,374,297 | + | C2H11g29059 | CX11g012041 | LOC_Os11g38920 | Os11g0602300 | - | Detail |
| C1H11g22718 | 11:20,376,154-20,377,035 | + | C2H11g01532 | CX11g014366 | LOC_Os11g38930 | Os11g0602400 | - | Detail |
| C1H11g02958 | 11:20,378,695-20,381,740 | + | C2H11g20025 | CX11g012143 | LOC_Os11g38959 | Os11g0602600 | - | Detail |
| C1H11g24448 | 11:20,382,537-20,382,869 | + | C2H10g07725 | CX10g009579 | - | - | - | Detail |
| C1H11g00031 | 11:20,384,199-20,384,783 | + | - | - | - | - | - | Detail |
| C1H11g27372 | 11:20,387,913-20,390,886 | + | C2H11g00258 | CX11g012143 | LOC_Os11g38959 | Os11g0602600 | - | Detail |
| C1H11g18295 | 11:20,392,182-20,401,320 | - | C2H11g00433 | CX11g011055 | LOC_Os11g38980 | Os11g0602800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038116 | 5:19,054,073-19,054,600 | - | C1H5g08079 | C2H5g12287 | LOC_Os05g38600 | Os05g0460900 | - | Detail |
| CX5g039642 | 5:19,057,062-19,061,418 | - | C1H5g24060 | C2H5g19612 | LOC_Os05g38610 | Os05g0461000 | - | Detail |
| CX5g040414 | 5:19,063,362-19,064,036 | + | C1H5g20771 | C2H5g00940 | LOC_Os05g38620 | Os05g0461200 | - | Detail |
| CX5g037842 | 5:19,064,631-19,067,186 | - | C1H5g01830 | C2H5g14913 | LOC_Os05g38630 | Os05g0461300 | - | Detail |
| CX5g038395 | 5:19,070,313-19,070,564 | - | - | - | - | Os05g0461350 | - | Detail |
| CX5g038934 | 5:19,072,606-19,073,326 | - | C1H5g11008 | C2H5g14035 | LOC_Os05g38640 | Os05g0461400 | - | Detail |
| CX5g039712 | 5:19,081,992-19,082,279 | + | C1H5g05333 | C2H5g30394 | LOC_Os05g38660 | Os05g0461600 | - | Detail |
| CX5g037526 | 5:19,090,192-19,090,899 | - | C1H5g23888 | C2H5g00554 | LOC_Os05g38680 | Os05g0462000 | - | Detail |
| CX5g037861 | 5:19,107,101-19,108,255 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g38690 | Os05g0462200 | - | Detail |
| CX5g038414 | 5:19,114,919-19,121,251 | - | C1H5g28074 | C2H5g10261 | LOC_Os05g38710 | Os05g0462301 | - | Detail |
| CX5g037480 | 5:19,129,455-19,130,813 | + | C1H5g08937 | C2H5g13178 | LOC_Os05g38720 | Os05g0462500 | - | Detail |
| CX5g038063 | 5:19,136,090-19,136,506 | - | - | C2H5g00997 | LOC_Os01g23600 | Os01g0337700 | - | Detail |
| CX5g040696 | 5:19,138,000-19,145,831 | - | C1H5g16481 | C2H5g23688 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| CX5g040997 | 5:19,147,495-19,147,806 | - | C1H5g21036 | C2H5g22701 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| CX5g040276 | 5:19,151,548-19,151,838 | - | C1H5g10476 | C2H5g30583 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| CX5g040728 | 5:19,152,975-19,154,830 | - | C1H5g21054 | C2H5g09732 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| CX5g041103 | 5:19,161,229-19,163,606 | - | C1H5g22054 | C2H5g02393 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| CX5g038806 | 5:19,163,926-19,166,363 | + | C1H5g20773 | C2H5g25319 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| CX5g039882 | 5:19,169,055-19,173,879 | + | C1H5g12108 | C2H5g01133 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| CX5g040078 | 5:19,176,192-19,178,797 | - | C1H5g15206 | C2H5g16713 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |