| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g17800 | 1:35,072,056-35,073,345 | - | C2H1g26270 | CX1g005194 | - | Os01g0910500 | - | Detail |
| C1H1g26876 | 1:35,081,611-35,081,916 | - | - | CX1g000843 | LOC_Os01g68290 | Os01g0910800 | - | Detail |
| C1H1g03499 | 1:35,084,879-35,085,157 | - | - | CX1g003300 | LOC_Os01g68300 | Os01g0910900 | - | Detail |
| C1H1g25320 | 1:35,086,408-35,088,914 | - | C2H1g25905 | CX1g002099 | LOC_Os01g68310 | Os01g0911000 | - | Detail |
| C1H1g12270 | 1:35,090,727-35,095,011 | - | C2H1g09546 | CX1g001970 | LOC_Os01g68320 | Os01g0911100 | - | Detail |
| C1H1g28018 | 1:35,096,360-35,102,699 | + | C2H1g26092 | CX1g005611 | LOC_Os01g68324 | Os01g0911200 | - | Detail |
| C1H1g15073 | 1:35,103,367-35,107,918 | - | C2H1g20198 | CX1g006627 | LOC_Os01g68330 | Os01g0911300 | OsABCB24 | Detail |
| C1H1g14649 | 1:35,113,267-35,114,623 | - | - | CX1g002624 | - | - | - | Detail |
| C1H1g05271 | 1:35,119,178-35,122,621 | - | C2H1g13016 | CX1g003857 | LOC_Os01g68370 | Os01g0911700 | - | Detail |
| C1H1g30427 | 1:35,126,936-35,133,786 | + | C2H1g08337 | CX1g000675 | LOC_Os01g68380 | Os01g0911800 | - | Detail |
| C1H1g22874 | 1:35,134,078-35,138,723 | - | C2H1g12867 | CX1g002890 | LOC_Os01g68390 | Os01g0911900 | - | Detail |
| C1H1g22265 | 1:35,145,377-35,146,180 | + | C2H1g05404 | CX1g000734 | LOC_Os01g68420 | Os01g0912400 | - | Detail |
| C1H1g21619 | 1:35,148,025-35,151,944 | + | C2H1g23756 | CX1g000160 | LOC_Os01g68440 | Os01g0912600 | - | Detail |
| C1H1g25658 | 1:35,152,477-35,154,767 | + | C2H1g28134 | CX1g001438 | LOC_Os01g68450 | Os01g0912700 | - | Detail |
| C1H1g27519 | 1:35,157,732-35,158,615 | + | C2H1g22864 | CX1g003568 | LOC_Os01g68480 | Os01g0913000 | - | Detail |
| C1H1g22590 | 1:35,159,961-35,161,562 | - | C2H1g29005 | CX1g000736 | LOC_Os01g68490 | Os01g0912900 | - | Detail |
| C1H1g25855 | 1:35,165,015-35,165,807 | - | C2H1g04876 | CX1g006784 | LOC_Os01g68500 | Os01g0913100 | qSL-1f | Detail |
| C1H1g24123 | 1:35,172,229-35,177,165 | + | C2H1g30522 | CX1g001377 | LOC_Os01g68510 | Os01g0913300 | - | Detail |
| C1H1g23891 | 1:35,177,818-35,181,920 | - | C2H1g30357 | CX1g002741 | LOC_Os01g68524 | Os01g0913400 | - | Detail |
| C1H1g15441 | 1:35,184,042-35,185,340 | - | C2H1g04944 | CX1g003908 | LOC_Os01g68540 | Os01g0913600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g038116 | 5:19,054,073-19,054,600 | - | C1H5g08079 | C2H5g12287 | LOC_Os05g38600 | Os05g0460900 | - | Detail |
| CX5g039642 | 5:19,057,062-19,061,418 | - | C1H5g24060 | C2H5g19612 | LOC_Os05g38610 | Os05g0461000 | - | Detail |
| CX5g040414 | 5:19,063,362-19,064,036 | + | C1H5g20771 | C2H5g00940 | LOC_Os05g38620 | Os05g0461200 | - | Detail |
| CX5g037842 | 5:19,064,631-19,067,186 | - | C1H5g01830 | C2H5g14913 | LOC_Os05g38630 | Os05g0461300 | - | Detail |
| CX5g038395 | 5:19,070,313-19,070,564 | - | - | - | - | Os05g0461350 | - | Detail |
| CX5g038934 | 5:19,072,606-19,073,326 | - | C1H5g11008 | C2H5g14035 | LOC_Os05g38640 | Os05g0461400 | - | Detail |
| CX5g039712 | 5:19,081,992-19,082,279 | + | C1H5g05333 | C2H5g30394 | LOC_Os05g38660 | Os05g0461600 | - | Detail |
| CX5g037526 | 5:19,090,192-19,090,899 | - | C1H5g23888 | C2H5g00554 | LOC_Os05g38680 | Os05g0462000 | - | Detail |
| CX5g037861 | 5:19,107,101-19,108,255 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g38690 | Os05g0462200 | - | Detail |
| CX5g038414 | 5:19,114,919-19,121,251 | - | C1H5g28074 | C2H5g10261 | LOC_Os05g38710 | Os05g0462301 | - | Detail |
| CX5g037480 | 5:19,129,455-19,130,813 | + | C1H5g08937 | C2H5g13178 | LOC_Os05g38720 | Os05g0462500 | - | Detail |
| CX5g038063 | 5:19,136,090-19,136,506 | - | - | C2H5g00997 | LOC_Os01g23600 | Os01g0337700 | - | Detail |
| CX5g040696 | 5:19,138,000-19,145,831 | - | C1H5g16481 | C2H5g23688 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| CX5g040997 | 5:19,147,495-19,147,806 | - | C1H5g21036 | C2H5g22701 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| CX5g040276 | 5:19,151,548-19,151,838 | - | C1H5g10476 | C2H5g30583 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| CX5g040728 | 5:19,152,975-19,154,830 | - | C1H5g21054 | C2H5g09732 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| CX5g041103 | 5:19,161,229-19,163,606 | - | C1H5g22054 | C2H5g02393 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| CX5g038806 | 5:19,163,926-19,166,363 | + | C1H5g20773 | C2H5g25319 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| CX5g039882 | 5:19,169,055-19,173,879 | + | C1H5g12108 | C2H5g01133 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| CX5g040078 | 5:19,176,192-19,178,797 | - | C1H5g15206 | C2H5g16713 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |