| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24206 | 3:8,667,771-8,672,718 | + | C1H3g05382 | CX3g025186 | LOC_Os03g17730 | Os03g0286200 | - | Detail |
| C2H3g05135 | 3:8,677,799-8,682,189 | + | C1H3g30819 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C2H3g11924 | 3:8,683,738-8,686,415 | - | C1H3g23357 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C2H3g28874 | 3:8,695,021-8,697,752 | + | C1H3g16747 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C2H3g08715 | 3:8,699,607-8,699,900 | - | C1H3g27086 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C2H3g22847 | 3:8,712,856-8,714,795 | - | C1H3g29184 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C2H3g20359 | 3:8,722,326-8,723,144 | - | C1H3g05095 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C2H3g27675 | 3:8,735,429-8,742,014 | + | C1H3g02097 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C2H3g09757 | 3:8,747,148-8,751,931 | + | C1H3g16177 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C2H3g14774 | 3:8,753,869-8,755,869 | - | C1H3g12393 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C2H3g27564 | 3:8,755,868-8,758,577 | + | C1H3g31312 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C2H3g22831 | 3:8,759,496-8,765,252 | + | - | - | - | Os02g0151600 | - | Detail |
| C2H3g23362 | 3:8,774,283-8,779,488 | + | C1H3g00118 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C2H3g17267 | 3:8,780,761-8,782,793 | + | C1H3g25481 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C2H3g21876 | 3:8,783,154-8,787,793 | + | C1H3g14781 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C2H3g27997 | 3:8,789,437-8,792,622 | + | C1H3g27293 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C2H3g11409 | 3:8,793,554-8,795,466 | - | C1H3g19930 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C2H3g03519 | 3:8,799,470-8,803,591 | + | C1H3g10814 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C2H3g04708 | 3:8,803,959-8,806,458 | + | C1H3g03942 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C2H3g30489 | 3:8,811,026-8,816,343 | + | C1H3g28173 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g041089 | 5:18,927,580-18,930,785 | - | C1H5g29915 | C2H5g00805 | LOC_Os05g38370 | Os05g0458100 | - | Detail |
| CX5g037231 | 5:18,934,220-18,934,483 | - | C1H5g09153 | C2H5g23848 | LOC_Os05g38380 | Os05g0458200 | - | Detail |
| CX5g038667 | 5:18,937,288-18,940,011 | - | C1H5g01083 | C2H5g08194 | LOC_Os05g38390 | Os05g0458300 | - | Detail |
| CX5g036806 | 5:18,942,651-18,952,000 | + | C1H5g05610 | C2H5g09696 | LOC_Os05g38400 | Os05g0458400 | - | Detail |
| CX5g039723 | 5:18,954,783-18,956,721 | - | C1H5g13909 | C2H5g22786 | LOC_Os05g38410 | Os05g0458500 | - | Detail |
| CX5g039152 | 5:18,963,225-18,965,149 | + | C1H5g13909 | C2H5g22786 | LOC_Os05g38410 | Os05g0458600 | - | Detail |
| CX5g037139 | 5:18,971,323-18,977,998 | - | C1H5g06967 | C2H5g14046 | LOC_Os05g38460 | Os05g0459000 | OsMYB3R2-L | Detail |
| CX5g041142 | 5:18,981,665-18,982,234 | + | - | C2H5g14977 | - | Os05g0459200 | - | Detail |
| CX5g039690 | 5:18,986,132-18,986,815 | + | C1H5g11303 | C2H5g27082 | LOC_Os05g38470 | Os05g0459300 | - | Detail |
| CX5g039998 | 5:18,991,285-18,991,443 | + | - | - | - | - | - | Detail |
| CX5g041038 | 5:18,992,812-18,995,953 | + | C1H5g22722 | C2H5g02762 | LOC_Os05g38480 | Os05g0459400 | - | Detail |
| CX5g037014 | 5:18,999,259-19,003,758 | + | C1H5g27985 | C2H5g17337 | LOC_Os05g38490 | Os05g0459600 | - | Detail |
| CX5g040529 | 5:19,006,184-19,007,506 | + | C1H5g26616 | C2H5g15850 | LOC_Os05g38500 | Os05g0459700 | - | Detail |
| CX5g039696 | 5:19,014,946-19,015,951 | + | C1H5g21623 | C2H5g03630 | LOC_Os05g38520 | Os05g0459900 | - | Detail |
| CX5g037601 | 5:19,018,484-19,021,263 | - | C1H5g06999 | C2H5g16384 | LOC_Os05g38530 | Os05g0460000 | - | Detail |
| CX5g039299 | 5:19,032,886-19,036,373 | + | C1H5g19906 | C2H5g11460 | LOC_Os05g38550 | Os05g0460200 | - | Detail |
| CX5g037542 | 5:19,041,235-19,041,666 | + | C1H5g22852 | C2H5g26633 | LOC_Os05g38560 | Os05g0460475 | - | Detail |
| CX5g041122 | 5:19,041,834-19,045,088 | - | C1H5g25738 | C2H5g11086 | LOC_Os05g38570 | Os05g0460600 | - | Detail |
| CX5g037940 | 5:19,046,388-19,048,412 | - | C1H5g25326 | C2H5g25868 | LOC_Os05g38580 | Os05g0460700 | - | Detail |
| CX5g038780 | 5:19,049,350-19,052,100 | - | C1H5g26281 | C2H5g10587 | LOC_Os05g38590 | Os05g0460800 | - | Detail |